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Modifications and functional genomics of human transfer RNA

Cell research, 2018-04, Vol.28 (4), p.395-404

Pan, Tao

2018

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RNA Cloaking by Reversible Acylation

Angewandte Chemie International Edition, 2018-03, Vol.57 (12), p.3059-3063

International ed. in English, 2018

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RNA structure probing reveals the structural basis of Dicer binding and cleavage

Nature communications, 2021-06, Vol.12 (1), p.3397-12, Article 3397

2021

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Mapping a Systematic Ribozyme Fitness Landscape Reveals a Frustrated Evolutionary Network for Self-Aminoacylating RNA

Journal of the American Chemical Society, 2019-04, Vol.141 (15), p.6213-6223

2019

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Selective 2'-hydroxyl acylation analyzed by primer extension and mutational profiling (SHAPE-MaP) for direct, versatile and accurate RNA structure analysis

Nature protocols, 2015-11, Vol.10 (11), p.1643-1669

2015

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Cotranscriptional folding of a riboswitch at nucleotide resolution

Nature structural & molecular biology, 2016-12, Vol.23 (12), p.1124-1131

2016

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RNA motif discovery by SHAPE and mutational profiling (SHAPE-MaP)

Nature methods, 2014-09, Vol.11 (9), p.959-965

2014

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Modeling and automation of sequencing-based characterization of RNA structure

Proceedings of the National Academy of Sciences - PNAS, 2011-07, Vol.108 (27), p.11069-11074

2011

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RNA G-quadruplex structures exist and function in vivo in plants

Genome Biology, 2020-09, Vol.21 (1), p.226-226, Article 226

2020

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RNA Structure Analysis at Single Nucleotide Resolution by Selective 2‘-Hydroxyl Acylation and Primer Extension (SHAPE)

Journal of the American Chemical Society, 2005-03, Vol.127 (12), p.4223-4231

2005

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DNA Tiling Enables Precise Acylation‐Based Labeling and Control of mRNA

Angewandte Chemie International Edition, 2021-12, Vol.60 (51), p.26798-26805

International ed. in English, 2021

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High-throughput SHAPE analysis reveals structures in HIV-1 genomic RNA strongly conserved across distinct biological states

PLoS biology, 2008-04, Vol.6 (4), p.e96-e96

2008

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Ribosome association primes the stringent factor Rel for tRNA-dependent locking in the A-site and activation of (p)ppGpp synthesis

Nucleic acids research, 2021-01, Vol.49 (1), p.444-457

2021

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A highly flexible tRNA acylation method for non-natural polypeptide synthesis

Nature methods, 2006-05, Vol.3 (5), p.357-359

2006

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The Dynamic Nature of RNA as Key to Understanding Riboswitch Mechanisms

Accounts of chemical research, 2011-12, Vol.44 (12), p.1339-1348

2011

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Structural Analysis using SHALiPE to Reveal RNA G-Quadruplex Formation in Human Precursor MicroRNA

Angewandte Chemie (International ed.), 2016-07, Vol.55 (31), p.8958-8961

International ed. in English, 2016

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Selective 2′-hydroxyl acylation analyzed by primer extension (SHAPE): quantitative RNA structure analysis at single nucleotide resolution

Nature protocols, 2006-11, Vol.1 (3), p.1610-1616

2006

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Reversible RNA acylation for control of CRISPR–Cas9 gene editing

Chemical science (Cambridge), 2020, Vol.11 (4), p.1011-1016

2020

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Ghrelin octanoylation mediated by an orphan lipid transferase

Proceedings of the National Academy of Sciences - PNAS, 2008-04, Vol.105 (17), p.6320-6325

2008

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Simple alkanoyl acylating agents for reversible RNA functionalization and control

Chemical communications (Cambridge, England), 2019-04, Vol.55 (35), p.5135-5138

2019

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Distributed biotin-streptavidin transcription roadblocks for mapping cotranscriptional RNA folding

Nucleic acids research, 2017-07, Vol.45 (12), p.e109-e109

2017

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Following movement of the L1 stalk between three functional states in single ribosomes

Proceedings of the National Academy of Sciences - PNAS, 2009-02, Vol.106 (8), p.2571-2576

2009

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Identification of Two Distinct Hybrid State Intermediates on the Ribosome

Molecular cell, 2007-02, Vol.25 (4), p.505-517

2007

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Structural dynamics of the aminoacylation and proofreading functional cycle of bacterial leucyl-tRNA synthetase

Nature structural & molecular biology, 2012-07, Vol.19 (7), p.677-684

2012

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Modifications and functional genomics of human transfer RNA

RNA Cloaking by Reversible Acylation

RNA structure probing reveals the structural basis of Dicer binding and cleavage

Mapping a Systematic Ribozyme Fitness Landscape Reveals a Frustrated Evolutionary Network for Self-Aminoacylating RNA

Selective 2'-hydroxyl acylation analyzed by primer extension and mutational profiling (SHAPE-MaP) for direct, versatile and accurate RNA structure analysis

Cotranscriptional folding of a riboswitch at nucleotide resolution

RNA motif discovery by SHAPE and mutational profiling (SHAPE-MaP)

Modeling and automation of sequencing-based characterization of RNA structure

RNA G-quadruplex structures exist and function in vivo in plants

RNA Structure Analysis at Single Nucleotide Resolution by Selective 2‘-Hydroxyl Acylation and Primer Extension (SHAPE)

DNA Tiling Enables Precise Acylation‐Based Labeling and Control of mRNA

High-throughput SHAPE analysis reveals structures in HIV-1 genomic RNA strongly conserved across distinct biological states

Ribosome association primes the stringent factor Rel for tRNA-dependent locking in the A-site and activation of (p)ppGpp synthesis

A highly flexible tRNA acylation method for non-natural polypeptide synthesis

The Dynamic Nature of RNA as Key to Understanding Riboswitch Mechanisms

Suppression of a single BAHD gene in Setaria viridis causes large, stable decreases in cell wall feruloylation and increases biomass digestibility

Structural Analysis using SHALiPE to Reveal RNA G-Quadruplex Formation in Human Precursor MicroRNA

Selective 2′-hydroxyl acylation analyzed by primer extension (SHAPE): quantitative RNA structure analysis at single nucleotide resolution

Reversible RNA acylation for control of CRISPR–Cas9 gene editing

Ghrelin octanoylation mediated by an orphan lipid transferase

Simple alkanoyl acylating agents for reversible RNA functionalization and control

Distributed biotin-streptavidin transcription roadblocks for mapping cotranscriptional RNA folding

Following movement of the L1 stalk between three functional states in single ribosomes

Identification of Two Distinct Hybrid State Intermediates on the Ribosome

Structural dynamics of the aminoacylation and proofreading functional cycle of bacterial leucyl-tRNA synthetase

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