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Stripenn detects architectural stripes from chromatin conformation data using computer vision

Nature communications, 2022-03, Vol.13 (1), p.1602-14, Article 1602

2022

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Epigenetic scarring of exhausted T cells hinders memory differentiation upon eliminating chronic antigenic stimulation

Nature immunology, 2021-08, Vol.22 (8), p.1008-1019

2021

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TooManyCells identifies and visualizes relationships of single-cell clades

Nature methods, 2020-04, Vol.17 (4), p.405-413

2020

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Trends of low physical activity among Iranian adolescents across urban and rural areas during 2006-2011

Scientific reports, 2020-12, Vol.10 (1), p.21318-21318, Article 21318

2020

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Opposing regulation of the locus encoding IL-17 through direct, reciprocal actions of STAT3 and STAT5

Nature immunology, 2011-03, Vol.12 (3), p.247-254

2011

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Early Th1 Cell Differentiation Is Marked by a Tfh Cell-like Transition

Immunity (Cambridge, Mass.), 2011-12, Vol.35 (6), p.919-931

2011

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TCF-1 mediates chromatin intermingling during T cell development

Nature immunology, 2022-07, Vol.23 (7), p.1000-1001

2022

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α Cell dysfunction in islets from nondiabetic, glutamic acid decarboxylase autoantibody-positive individuals

The Journal of clinical investigation, 2022-06, Vol.132 (11)

2022

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Mechanisms underlying helper T-cell plasticity: Implications for immune-mediated disease

Journal of allergy and clinical immunology, 2013-05, Vol.131 (5), p.1276-1287

2013

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Remodeling the chromatin landscape in T lymphocytes by a division of labor among transcription factors

Immunological reviews, 2021-03, Vol.300 (1), p.167-180

Vahedi, Golnaz

2021

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Asymmetric Action of STAT Transcription Factors Drives Transcriptional Outputs and Cytokine Specificity

Immunity (Cambridge, Mass.), 2015-05, Vol.42 (5), p.877-889

2015

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AnnoSpat annotates cell types and quantifies cellular arrangements from spatial proteomics

Nature communications, 2024-05, Vol.15 (1), p.3744-3744, Article 3744

2024

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Topologically associating domains are disrupted by evolutionary genome rearrangements forming species-specific enhancer connections in mice and humans

Cell reports (Cambridge), 2022-05, Vol.39 (5), p.110769-110769, Article 110769

2022

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Author Correction: Epigenetic scarring of exhausted T cells hinders memory differentiation upon eliminating chronic antigenic stimulation

Nature immunology, 2021-11, Vol.22 (11), p.1465-1465

2021

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A mouse model of HIES reveals pro- and anti-inflammatory functions of STAT3

Blood, 2014-05, Vol.123 (19), p.2978-2987

2014

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A Cosine Similarity-Based Method to Infer Variability of Chromatin Accessibility at the Single-Cell Level

Frontiers in genetics, 2018-08, Vol.9, p.319-319

2018

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Perceived social support and health-related quality of life (HRQoL) in Tehranian adults: Tehran lipid and glucose study

Health and quality of life outcomes, 2018-05, Vol.16 (1), p.90-90, Article 90

2018

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Predisposing factors of long-term responsiveness in a cardio-metabolic cohort: Tehran Lipid and Glucose Study

BMC medical research methodology, 2021-08, Vol.21 (1), p.1-161, Article 161

2021

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Untangling the genetics of beta cell dysfunction and death in type 1 diabetes

Molecular metabolism (Germany), 2024-08, Vol.86, p.101973, Article 101973

2024

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Regulation of T-Cell Activation and Differentiation

Blood, 2016-12, Vol.128 (22), p.SCI-11-SCI-11

Vahedi, Golnaz

2016

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Pioneer factors in T cells

Experimental hematology, 2017-09, Vol.53, p.S37-S37

Vahedi, Golnaz

2017

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Transcription factors combine to paint the methylation landscape

Trends in immunology, 2021-12, Vol.42 (12), p.1060-1062

2021

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Tissue inhibitor of metalloproteinase 1 is preferentially expressed in Th1 and Th17 T-helper cell subsets and is a direct STAT target gene

PloS one, 2013-03, Vol.8 (3), p.e59367

2013

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Wriggly woes: Helminths stirring up T cell trouble

Immunity (Cambridge, Mass.), 2024-08, Vol.57 (8), p.1726-1728

2024

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Stripenn detects architectural stripes from chromatin conformation data using computer vision

Epigenetic scarring of exhausted T cells hinders memory differentiation upon eliminating chronic antigenic stimulation

TooManyCells identifies and visualizes relationships of single-cell clades

Trends of low physical activity among Iranian adolescents across urban and rural areas during 2006-2011

Opposing regulation of the locus encoding IL-17 through direct, reciprocal actions of STAT3 and STAT5

Early Th1 Cell Differentiation Is Marked by a Tfh Cell-like Transition

TCF-1 mediates chromatin intermingling during T cell development

α Cell dysfunction in islets from nondiabetic, glutamic acid decarboxylase autoantibody-positive individuals

Mechanisms underlying helper T-cell plasticity: Implications for immune-mediated disease

Remodeling the chromatin landscape in T lymphocytes by a division of labor among transcription factors

Asymmetric Action of STAT Transcription Factors Drives Transcriptional Outputs and Cytokine Specificity

AnnoSpat annotates cell types and quantifies cellular arrangements from spatial proteomics

Exome-wide evaluation of rare coding variants using electronic health records identifies new gene-phenotype associations

Topologically associating domains are disrupted by evolutionary genome rearrangements forming species-specific enhancer connections in mice and humans

Author Correction: Epigenetic scarring of exhausted T cells hinders memory differentiation upon eliminating chronic antigenic stimulation

A mouse model of HIES reveals pro- and anti-inflammatory functions of STAT3

A Cosine Similarity-Based Method to Infer Variability of Chromatin Accessibility at the Single-Cell Level

Perceived social support and health-related quality of life (HRQoL) in Tehranian adults: Tehran lipid and glucose study

Predisposing factors of long-term responsiveness in a cardio-metabolic cohort: Tehran Lipid and Glucose Study

Untangling the genetics of beta cell dysfunction and death in type 1 diabetes

Regulation of T-Cell Activation and Differentiation

Pioneer factors in T cells

Transcription factors combine to paint the methylation landscape

Tissue inhibitor of metalloproteinase 1 is preferentially expressed in Th1 and Th17 T-helper cell subsets and is a direct STAT target gene

Wriggly woes: Helminths stirring up T cell trouble

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