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Identification of LZTFL1 as a candidate effector gene at a COVID-19 risk locus

Nature genetics, 2021-11, Vol.53 (11), p.1606-1615

2021

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Tissue-specific CTCF-cohesin-mediated chromatin architecture delimits enhancer interactions and function in vivo

Nature cell biology, 2017-08, Vol.19 (8), p.952-961

2017

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DOT1L inhibition reveals a distinct subset of enhancers dependent on H3K79 methylation

Nature communications, 2019-06, Vol.10 (1), p.2803-15, Article 2803

2019

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Defining genome architecture at base-pair resolution

Nature (London), 2021-07, Vol.595 (7865), p.125-129

2021

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Hypoxia Induces Transcriptional and Translational Downregulation of the Type I IFN Pathway in Multiple Cancer Cell Types

Cancer research (Chicago, Ill.), 2020-12, Vol.80 (23), p.5245-5256

2020

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Natural and Experimental Rewiring of Gene Regulatory Regions

Annual review of genomics and human genetics, 2022-08, Vol.23 (1), p.73-97

2022

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Absolute Quantification of Transcription Factors Reveals Principles of Gene Regulation in Erythropoiesis

Molecular cell, 2020-06, Vol.78 (5), p.960-974.e11

2020

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Single-allele chromatin interactions identify regulatory hubs in dynamic compartmentalized domains

Nature genetics, 2018-12, Vol.50 (12), p.1744-1751

2018

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A gain-of-function single nucleotide variant creates a new promoter which acts as an orientation-dependent enhancer-blocker

Nature communications, 2021-06, Vol.12 (1), p.3806-3806, Article 3806

2021

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Comparing the two leading erythroid lines BEL-A and HUDEP-2

Haematologica (Roma), 2020-08, Vol.105 (8), p.e389-e394

2020

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The chromatin remodeller ATRX facilitates diverse nuclear processes, in a stochastic manner, in both heterochromatin and euchromatin

Nature communications, 2022-06, Vol.13 (1), p.3485-3485, Article 3485

2022

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LanceOtron: a deep learning peak caller for genome sequencing experiments

Bioinformatics, 2022-09, Vol.38 (18), p.4255-4263

2022

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High-resolution targeted 3C interrogation of cis-regulatory element organization at genome-wide scale

Nature communications, 2021-01, Vol.12 (1), p.531-531, Article 531

2021

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Erratum to: Comparing the two leading erythroid lines BEL-A and HUDEP-2

Haematologica (Roma), 2024-01, Vol.109 (1), p.364

2024

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Enhancers predominantly regulate gene expression during differentiation via transcription initiation

Molecular cell, 2021-03, Vol.81 (5), p.983-997.e7

2021

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Dynamic Runx1 chromatin boundaries affect gene expression in hematopoietic development

Nature communications, 2022-02, Vol.13 (1), p.773-773, Article 773

2022

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Capture-C: a modular and flexible approach for high-resolution chromosome conformation capture

Nature protocols, 2022-02, Vol.17 (2), p.445-475

2022

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Reactivation of a developmentally silenced embryonic globin gene

Nature communications, 2021-07, Vol.12 (1), p.4439-15, Article 4439

2021

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Editing an α-globin enhancer in primary human hematopoietic stem cells as a treatment for β-thalassemia

Nature communications, 2017-09, Vol.8 (1), p.424-11, Article 424

2017

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Impaired DNA demethylation of C/EBP sites causes premature aging

Genes & development, 2018-06, Vol.32 (11-12), p.742-762

2018

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Duplication and Functional Divergence of Branched-Chain Amino Acid Biosynthesis Genes in Aspergillus nidulans

mBio, 2021-06, Vol.12 (3), p.e0076821-e0076821

2021

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Author Correction: Capture-C: a modular and flexible approach for high-resolution chromosome conformation capture

Nature protocols, 2023-10, Vol.18 (10), p.3155-3155

2023

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Recapitulation of erythropoiesis in congenital dyserythropoietic anaemia type I (CDA-I) identifies defects in differentiation and nucleolar abnormalities

Haematologica (Roma), 2021-11, Vol.106 (11), p.2960-2970

2021

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Robust detection of chromosomal interactions from small numbers of cells using low-input Capture-C

Nucleic acids research, 2017-12, Vol.45 (22), p.e184-e184

2017

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A remarkable case of HbH disease illustrates the relative contributions of the α-globin enhancers to gene expression

Blood, 2021-01, Vol.137 (4), p.572-575

2021

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Identification of LZTFL1 as a candidate effector gene at a COVID-19 risk locus

Tissue-specific CTCF-cohesin-mediated chromatin architecture delimits enhancer interactions and function in vivo

DOT1L inhibition reveals a distinct subset of enhancers dependent on H3K79 methylation

Defining genome architecture at base-pair resolution

Hypoxia Induces Transcriptional and Translational Downregulation of the Type I IFN Pathway in Multiple Cancer Cell Types

Natural and Experimental Rewiring of Gene Regulatory Regions

Absolute Quantification of Transcription Factors Reveals Principles of Gene Regulation in Erythropoiesis

Single-allele chromatin interactions identify regulatory hubs in dynamic compartmentalized domains

A gain-of-function single nucleotide variant creates a new promoter which acts as an orientation-dependent enhancer-blocker

Comparing the two leading erythroid lines BEL-A and HUDEP-2

The chromatin remodeller ATRX facilitates diverse nuclear processes, in a stochastic manner, in both heterochromatin and euchromatin

LanceOtron: a deep learning peak caller for genome sequencing experiments

High-resolution targeted 3C interrogation of cis-regulatory element organization at genome-wide scale

Erratum to: Comparing the two leading erythroid lines BEL-A and HUDEP-2

Enhancers predominantly regulate gene expression during differentiation via transcription initiation

Dynamic Runx1 chromatin boundaries affect gene expression in hematopoietic development

Capture-C: a modular and flexible approach for high-resolution chromosome conformation capture

Reactivation of a developmentally silenced embryonic globin gene

Editing an α-globin enhancer in primary human hematopoietic stem cells as a treatment for β-thalassemia

Impaired DNA demethylation of C/EBP sites causes premature aging

Duplication and Functional Divergence of Branched-Chain Amino Acid Biosynthesis Genes in Aspergillus nidulans

Author Correction: Capture-C: a modular and flexible approach for high-resolution chromosome conformation capture

Recapitulation of erythropoiesis in congenital dyserythropoietic anaemia type I (CDA-I) identifies defects in differentiation and nucleolar abnormalities

Robust detection of chromosomal interactions from small numbers of cells using low-input Capture-C

A remarkable case of HbH disease illustrates the relative contributions of the α-globin enhancers to gene expression

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