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Single-cell RNA counting at allele and isoform resolution using Smart-seq3

Nature biotechnology, 2020-06, Vol.38 (6), p.708-714

2020

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Single-Cell RNA-Seq Reveals Dynamic, Random Monoallelic Gene Expression in Mammalian Cells

Science (American Association for the Advancement of Science), 2014-01, Vol.343 (6167), p.193-196

2014

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Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells

Nature biotechnology, 2012-08, Vol.30 (8), p.777-782

2012

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The Molecular Anatomy of Mouse Skin during Hair Growth and Rest

Cell stem cell, 2020-03, Vol.26 (3), p.441-457.e7

2020

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Genomic encoding of transcriptional burst kinetics

Nature (London), 2019, Vol.565 (7738), p.251-254

2019

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Laser capture microscopy coupled with Smart-seq2 for precise spatial transcriptomic profiling

Nature communications, 2016-07, Vol.7 (1), p.12139-12139, Article 12139

2016

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Position- and Hippo signaling-dependent plasticity during lineage segregation in the early mouse embryo

eLife, 2017-02, Vol.6

2017

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Electrophysiological, transcriptomic and morphologic profiling of single neurons using Patch-seq

Nature biotechnology, 2016-02, Vol.34 (2), p.199-203

2016

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Multimodal profiling of single-cell morphology, electrophysiology, and gene expression using Patch-seq

Nature protocols, 2017-12, Vol.12 (12), p.2531-2553

2017

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An abundance of ubiquitously expressed genes revealed by tissue transcriptome sequence data

PLoS computational biology, 2009-12, Vol.5 (12), p.e1000598-e1000598

2009

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Sequentially acting Sox transcription factors in neural lineage development

Genes & development, 2011-12, Vol.25 (23), p.2453-2464

2011

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Layer 4 of mouse neocortex differs in cell types and circuit organization between sensory areas

Nature communications, 2019-09, Vol.10 (1), p.4174-12, Article 4174

2019

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BMP Signaling and Its pSMAD1/5 Target Genes Differentially Regulate Hair Follicle Stem Cell Lineages

Cell stem cell, 2014-11, Vol.15 (5), p.619-633

2014

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Single-cell RNA sequencing reveals the mesangial identity and species diversity of glomerular cell transcriptomes

Nature communications, 2021-04, Vol.12 (1), p.2141-2141, Article 2141

2021

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Determinants of targeting by endogenous and exogenous microRNAs and siRNAs

RNA (Cambridge), 2007-11, Vol.13 (11), p.1894-1910

2007

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Transcription factor Nurr1 maintains fiber integrity and nuclear-encoded mitochondrial gene expression in dopamine neurons

Proceedings of the National Academy of Sciences - PNAS, 2013-02, Vol.110 (6), p.2360-2365

2013

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SoxB1-driven transcriptional network underlies neural-specific interpretation of morphogen signals

Proceedings of the National Academy of Sciences - PNAS, 2013-04, Vol.110 (18), p.7330-7335

2013

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Efficient and comprehensive representation of uniqueness for next-generation sequencing by minimum unique length analyses

PloS one, 2013-01, Vol.8 (1), p.e53822-e53822

2013

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Identification of spatial expression trends in single-cell gene expression data

Nature methods, 2018-05, Vol.15 (5), p.339-342

2018

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Abundance of female-biased and paucity of male-biased somatically expressed genes on the mouse X-chromosome

BMC genomics, 2012, Vol.13 (1), p.607-607

2012

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Regional and Strain-Specific Gene Expression Mapping in the Adult Mouse Brain

Proceedings of the National Academy of Sciences - PNAS, 2000-09, Vol.97 (20), p.11038-11043

2000

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CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing

Nature (London), 2011-11, Vol.479 (7371), p.74-79

2011

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Phenotypic variation of transcriptomic cell types in mouse motor cortex

Nature (London), 2021-10, Vol.598 (7879), p.144-150

2021

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Single-cell RNA counting at allele and isoform resolution using Smart-seq3

Single-Cell RNA-Seq Reveals Dynamic, Random Monoallelic Gene Expression in Mammalian Cells

Full-length mRNA-Seq from single-cell levels of RNA and individual circulating tumor cells

The Molecular Anatomy of Mouse Skin during Hair Growth and Rest

Genomic encoding of transcriptional burst kinetics

Laser capture microscopy coupled with Smart-seq2 for precise spatial transcriptomic profiling

Position- and Hippo signaling-dependent plasticity during lineage segregation in the early mouse embryo

Electrophysiological, transcriptomic and morphologic profiling of single neurons using Patch-seq

Multimodal profiling of single-cell morphology, electrophysiology, and gene expression using Patch-seq

An abundance of ubiquitously expressed genes revealed by tissue transcriptome sequence data

Sequentially acting Sox transcription factors in neural lineage development

Layer 4 of mouse neocortex differs in cell types and circuit organization between sensory areas

BMP Signaling and Its pSMAD1/5 Target Genes Differentially Regulate Hair Follicle Stem Cell Lineages

Single-cell RNA sequencing reveals the mesangial identity and species diversity of glomerular cell transcriptomes

Determinants of targeting by endogenous and exogenous microRNAs and siRNAs

Cell type composition and circuit organization of clonally related excitatory neurons in the juvenile mouse neocortex

Lymphomyeloid Contribution of an Immune-Restricted Progenitor Emerging Prior to Definitive Hematopoietic Stem Cells

Transcription factor Nurr1 maintains fiber integrity and nuclear-encoded mitochondrial gene expression in dopamine neurons

SoxB1-driven transcriptional network underlies neural-specific interpretation of morphogen signals

Efficient and comprehensive representation of uniqueness for next-generation sequencing by minimum unique length analyses

Identification of spatial expression trends in single-cell gene expression data

Abundance of female-biased and paucity of male-biased somatically expressed genes on the mouse X-chromosome

Regional and Strain-Specific Gene Expression Mapping in the Adult Mouse Brain

CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing

Phenotypic variation of transcriptomic cell types in mouse motor cortex

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