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Towards the physical basis of how intrinsic disorder mediates protein function

Archives of biochemistry and biophysics, 2012-08, Vol.524 (2), p.123-131

Chen, Jianhan

2012

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Residual Structure Accelerates Binding of Intrinsically Disordered ACTR by Promoting Efficient Folding upon Encounter

Journal of molecular biology, 2019-01, Vol.431 (2), p.422-432

2019

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Specific PIP2 binding promotes calcium activation of TMEM16A chloride channels

Communications biology, 2021-02, Vol.4 (1), p.1-10, Article 259

2021

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Topology-based modeling of intrinsically disordered proteins: Balancing intrinsic folding and intermolecular interactions

Proteins, structure, function, and bioinformatics, 2011-04, Vol.79 (4), p.1251-1266

2011

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Electrostatically accelerated encounter and folding for facile recognition of intrinsically disordered proteins

PLoS computational biology, 2013-11, Vol.9 (11), p.e1003363-e1003363

2013

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Modulation of the disordered conformational ensembles of the p53 transactivation domain by cancer-associated mutations

PLoS computational biology, 2015-04, Vol.11 (4), p.e1004247-e1004247

2015

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Targeting Intrinsically Disordered Proteins through Dynamic Interactions

Biomolecules (Basel, Switzerland), 2020-05, Vol.10 (5), p.743

2020

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Machine Learning Generation of Dynamic Protein Conformational Ensembles

Molecules (Basel, Switzerland), 2023-05, Vol.28 (10), p.4047

2023

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Hydrophobic gating in bundle-crossing ion channels: a case study of TRPV4

Communications biology, 2023-10, Vol.6 (1), p.1094-1094, Article 1094

2023

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Targeting TRP channels: recent advances in structure, ligand binding, and molecular mechanisms

Frontiers in molecular neuroscience, 2024-01, Vol.16, p.1334370

2024

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Residual structures, conformational fluctuations, and electrostatic interactions in the synergistic folding of two intrinsically disordered proteins

PLoS computational biology, 2012-01, Vol.8 (1), p.e1002353-e1002353

2012

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Recent advances in implicit solvent-based methods for biomolecular simulations

Current opinion in structural biology, 2008-04, Vol.18 (2), p.140-148

2008

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Physics-based modeling provides predictive understanding of selectively promiscuous substrate binding by Hsp70 chaperones

PLoS computational biology, 2021-11, Vol.17 (11), p.e1009567-e1009567

2021

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Advanced Sampling Methods for Multiscale Simulation of Disordered Proteins and Dynamic Interactions

Biomolecules (Basel, Switzerland), 2021-09, Vol.11 (10), p.1416

2021

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Coupled binding and folding of disordered SPIN N-terminal region in myeloperoxidase inhibition

Frontiers in molecular biosciences, 2023-02, Vol.10, p.1130189-1130189

2023

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Dynamics of the BH3-Only Protein Binding Interface of Bcl-xL

Biophysical journal, 2015-09, Vol.109 (5), p.1049-1057

2015

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Potential Conformational Heterogeneity of p53 Bound to S100B(ββ)

Journal of molecular biology, 2013-03, Vol.425 (6), p.999-1010

2013

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Electrostatically Accelerated Coupled Binding and Folding of Intrinsically Disordered Proteins

Journal of molecular biology, 2012-10, Vol.422 (5), p.674-684

2012

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Can molecular dynamics simulations provide high-resolution refinement of protein structure?

Proteins, structure, function, and bioinformatics, 2007-06, Vol.67 (4), p.922-930

2007

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Aromatic interactions with membrane modulate human BK channel activation

eLife, 2020-06, Vol.9

2020

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Intrinsically disordered proteins in a physics-based world

International Journal of Molecular Sciences, 2010-12, Vol.11 (12), p.5292-5309

2010

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Data Science for Integrated Dynamic Structural Biology—the 21st IUPAB Congress session summary commentary

Biophysical reviews, 2024-09

2024

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Atomistic Glimpse of the Orderly Chaos of One Protein

Biophysical journal, 2015-10, Vol.109 (8), p.1511-1512

Chen, Jianhan

2015

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Toward Accurate Coarse-Grained Simulations of Disordered Proteins and Their Dynamic Interactions

Journal of chemical information and modeling, 2022-09, Vol.62 (18), p.4523-4536

2022

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Activation of TMEM16F by inner gate charged mutations and possible lipid/ion permeation mechanisms

Biophysical journal, 2022-09, Vol.121 (18), p.3445-3457

2022

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Towards the physical basis of how intrinsic disorder mediates protein function

Residual Structure Accelerates Binding of Intrinsically Disordered ACTR by Promoting Efficient Folding upon Encounter

Specific PIP2 binding promotes calcium activation of TMEM16A chloride channels

Topology-based modeling of intrinsically disordered proteins: Balancing intrinsic folding and intermolecular interactions

Electrostatically accelerated encounter and folding for facile recognition of intrinsically disordered proteins

Modulation of the disordered conformational ensembles of the p53 transactivation domain by cancer-associated mutations

Targeting Intrinsically Disordered Proteins through Dynamic Interactions

Machine Learning Generation of Dynamic Protein Conformational Ensembles

Hydrophobic gating in bundle-crossing ion channels: a case study of TRPV4

Targeting TRP channels: recent advances in structure, ligand binding, and molecular mechanisms

Residual structures, conformational fluctuations, and electrostatic interactions in the synergistic folding of two intrinsically disordered proteins

Recent advances in implicit solvent-based methods for biomolecular simulations

Physics-based modeling provides predictive understanding of selectively promiscuous substrate binding by Hsp70 chaperones

Advanced Sampling Methods for Multiscale Simulation of Disordered Proteins and Dynamic Interactions

Coupled binding and folding of disordered SPIN N-terminal region in myeloperoxidase inhibition

Dynamics of the BH3-Only Protein Binding Interface of Bcl-xL

Potential Conformational Heterogeneity of p53 Bound to S100B(ββ)

Electrostatically Accelerated Coupled Binding and Folding of Intrinsically Disordered Proteins

Can molecular dynamics simulations provide high-resolution refinement of protein structure?

Aromatic interactions with membrane modulate human BK channel activation

Intrinsically disordered proteins in a physics-based world

Data Science for Integrated Dynamic Structural Biology—the 21st IUPAB Congress session summary commentary

Atomistic Glimpse of the Orderly Chaos of One Protein

Toward Accurate Coarse-Grained Simulations of Disordered Proteins and Their Dynamic Interactions

Activation of TMEM16F by inner gate charged mutations and possible lipid/ion permeation mechanisms

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