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Phylogenomics of Cas4 family nucleases

BMC evolutionary biology, 2017-11, Vol.17 (1), p.232, Article 232

2017

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Assessing the benefits of horizontal gene transfer by laboratory evolution and genome sequencing

BMC evolutionary biology, 2018-04, Vol.18 (1), p.54, Article 54

2018

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Duplication and expression of horizontally transferred polygalacturonase genes is associated with host range expansion of mirid bugs

BMC ecology and evolution, 2019-01, Vol.19 (1), p.12, Article 12

2019

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Widespread horizontal gene transfer from circular single-stranded DNA viruses to eukaryotic genomes

BMC evolutionary biology, 2011-09, Vol.11 (1), p.276, Article 276

2011

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A unique horizontal gene transfer event has provided the octocoral mitochondrial genome with an active mismatch repair gene that has potential for an unusual self-contained function

BMC evolutionary biology, 2011-07, Vol.11 (1), p.228, Article 228

2011

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A new fast method for inferring multiple consensus trees using k-medoids

BMC evolutionary biology, 2018-04, Vol.18 (1), p.48, Article 48

2018

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Multiple recent horizontal transfers of the cox1 intron in Solanaceae and extended co-conversion of flanking exons

BMC evolutionary biology, 2011-09, Vol.11, p.277

2011

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Phylogenetic evidence for extensive lateral acquisition of cellular genes by Nucleocytoplasmic large DNA viruses

BMC evolutionary biology, 2008-11, Vol.8 (1), p.320

2008

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Algorithms for computing parsimonious evolutionary scenarios for genome evolution, the last universal common ancestor and dominance of horizontal gene transfer in the evolution of prokaryotes

BMC evolutionary biology, 2003-01, Vol.3 (1), p.2, Article 2

2003

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Chlamydial genes shed light on the evolution of photoautotrophic eukaryotes

BMC evolutionary biology, 2008-07, Vol.8 (1), p.203

2008

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Computational archaeology of the Pristionchus pacificus genome reveals evidence of horizontal gene transfers from insects

BMC evolutionary biology, 2011-08, Vol.11 (1), p.239, Article 239

2011

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Accounting for horizontal gene transfers explains conflicting hypotheses regarding the position of aquificales in the phylogeny of Bacteria

BMC evolutionary biology, 2008-10, Vol.8 (1), p.272

2008

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Sulfate assimilation in eukaryotes: fusions, relocations and lateral transfers

BMC evolutionary biology, 2008-02, Vol.8 (1), p.39

2008

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Evolution of the apomixis transmitting chromosome in Pennisetum

BMC evolutionary biology, 2011-10, Vol.11 (1), p.289, Article 289

2011

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Evidence of recent interkingdom horizontal gene transfer between bacteria and Candida parapsilosis

BMC evolutionary biology, 2008-06, Vol.8 (1), p.181

2008

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Experimental design and statistical rigor in phylogenomics of horizontal and endosymbiotic gene transfer

BMC evolutionary biology, 2011-09, Vol.11 (1), p.259, Article 259

Stiller, John W

2011

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Identification of multiple independent horizontal gene transfers into poxviruses using a comparative genomics approach

BMC evolutionary biology, 2008-02, Vol.8 (1), p.67

2008

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Evolution of four gene families with patchy phylogenetic distributions: influx of genes into protist genomes

BMC evolutionary biology, 2006-03, Vol.6 (1), p.27, Article 27

2006

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The impact of horizontal gene transfer in shaping operons and protein interaction networks--direct evidence of preferential attachment

BMC evolutionary biology, 2008-01, Vol.8 (1), p.23

2008

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On the origin of microbial ORFans: quantifying the strength of the evidence for viral lateral transfer

BMC evolutionary biology, 2006-08, Vol.6, p.63

2006

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Evolutionary relationships of Fusobacterium nucleatum based on phylogenetic analysis and comparative genomics

BMC evolutionary biology, 2004-11, Vol.4 (1), p.50, Article 50

2004

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The power of phylogenetic approaches to detect horizontally transferred genes

BMC evolutionary biology, 2007-03, Vol.7 (1), p.45

2007

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CR1 clade of non-LTR retrotransposons from Maculinea butterflies (Lepidoptera: Lycaenidae): evidence for recent horizontal transmission

BMC evolutionary biology, 2007-06, Vol.7 (1), p.93

2007

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Evolution of glutamate dehydrogenase genes: evidence for lateral gene transfer within and between prokaryotes and eukaryotes

BMC evolutionary biology, 2003-06, Vol.3 (1), p.14, Article 14

2003

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Paths of lateral gene transfer of lysyl-aminoacyl-tRNA synthetases with a unique evolutionary transition stage of prokaryotes coding for class I and II varieties by the same organisms

BMC evolutionary biology, 2006-03, Vol.6 (1), p.22, Article 22

2006

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Phylogenomics of Cas4 family nucleases

Assessing the benefits of horizontal gene transfer by laboratory evolution and genome sequencing

Duplication and expression of horizontally transferred polygalacturonase genes is associated with host range expansion of mirid bugs

Widespread horizontal gene transfer from circular single-stranded DNA viruses to eukaryotic genomes

A unique horizontal gene transfer event has provided the octocoral mitochondrial genome with an active mismatch repair gene that has potential for an unusual self-contained function

A new fast method for inferring multiple consensus trees using k-medoids

Multiple recent horizontal transfers of the cox1 intron in Solanaceae and extended co-conversion of flanking exons

Phylogenetic evidence for extensive lateral acquisition of cellular genes by Nucleocytoplasmic large DNA viruses

Algorithms for computing parsimonious evolutionary scenarios for genome evolution, the last universal common ancestor and dominance of horizontal gene transfer in the evolution of prokaryotes

Chlamydial genes shed light on the evolution of photoautotrophic eukaryotes

Computational archaeology of the Pristionchus pacificus genome reveals evidence of horizontal gene transfers from insects

Accounting for horizontal gene transfers explains conflicting hypotheses regarding the position of aquificales in the phylogeny of Bacteria

Sulfate assimilation in eukaryotes: fusions, relocations and lateral transfers

Evolution of the apomixis transmitting chromosome in Pennisetum

Evidence of recent interkingdom horizontal gene transfer between bacteria and Candida parapsilosis

Experimental design and statistical rigor in phylogenomics of horizontal and endosymbiotic gene transfer

Identification of multiple independent horizontal gene transfers into poxviruses using a comparative genomics approach

Evolution of four gene families with patchy phylogenetic distributions: influx of genes into protist genomes

The impact of horizontal gene transfer in shaping operons and protein interaction networks--direct evidence of preferential attachment

On the origin of microbial ORFans: quantifying the strength of the evidence for viral lateral transfer

Evolutionary relationships of Fusobacterium nucleatum based on phylogenetic analysis and comparative genomics

The power of phylogenetic approaches to detect horizontally transferred genes

CR1 clade of non-LTR retrotransposons from Maculinea butterflies (Lepidoptera: Lycaenidae): evidence for recent horizontal transmission

Evolution of glutamate dehydrogenase genes: evidence for lateral gene transfer within and between prokaryotes and eukaryotes

Paths of lateral gene transfer of lysyl-aminoacyl-tRNA synthetases with a unique evolutionary transition stage of prokaryotes coding for class I and II varieties by the same organisms

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