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CAVER Analyst 2.0: analysis and visualization of channels and tunnels in protein structures and molecular dynamics trajectories

Bioinformatics, 2018-10, Vol.34 (20), p.3586-3588

2018

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CAVER Analyst 1.0: graphic tool for interactive visualization and analysis of tunnels and channels in protein structures

Bioinformatics (Oxford, England), 2014-09, Vol.30 (18), p.2684-2685

2014

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Gram-scale production of recombinant microbial enzymes in shake flasks

FEMS microbiology letters, 2018-02, Vol.365 (2), p.1

2018

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FireProtASR: A Web Server for Fully Automated Ancestral Sequence Reconstruction

Briefings in bioinformatics, 2020-12, Vol.22 (4)

2020

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Physiological and proteomic approaches to evaluate the role of sterol binding in elicitin-induced resistance

Journal of experimental botany, 2012-03, Vol.63 (5), p.2203-2215

2012

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SoluProt: prediction of soluble protein expression in Escherichia coli

Bioinformatics (Oxford, England), 2021-04, Vol.37 (1), p.23-28

2021

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CaverDock: a molecular docking-based tool to analyse ligand transport through protein tunnels and channels

Bioinformatics, 2019-12, Vol.35 (23), p.4986-4993

2019

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BenchStab: a tool for automated querying of web-based stability predictors

Bioinformatics (Oxford, England), 2024-09, Vol.40 (9)

2024

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pyCaverDock: Python implementation of the popular tool for analysis of ligand transport with advanced caching and batch calculation support

Bioinformatics (Oxford, England), 2023-08, Vol.39 (8)

2023

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FireProt 2.0: web-based platform for the fully automated design of thermostable proteins

Briefings in bioinformatics, 2023-11, Vol.25 (1)

2023

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PredictONCO: a web tool supporting decision-making in precision oncology by extending the bioinformatics predictions with advanced computing and machine learning

Briefings in bioinformatics, 2023-11, Vol.25 (1)

2023

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NewProt - a protein engineering portal

Protein engineering, design and selection, 2017-06, Vol.30 (6), p.441-447

2017

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Analysis of the reaction mechanism and substrate specificity of haloalkane dehalogenases by sequential and structural comparisons

Protein engineering, 1999-11, Vol.12 (11), p.989-998

1999

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Insights into the Functional Architecture of the Catalytic Center of a Maize β-Glucosidase Zm-P60.1

Plant physiology (Bethesda), 2001-11, Vol.127 (3), p.973-985

2001

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TRITON: in silico construction of protein mutants and prediction of their activities

Bioinformatics, 2000-09, Vol.16 (9), p.845-846

2000

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Insights into the functional architecture of the catalytic center of a maize (beta-glucosidase) Zm-p60.1

Plant physiology (Bethesda), 2001-11, Vol.127 (3), p.973

2001

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Retron reverse transcriptase rrtT is ubiquitous in strains of Salmonella enterica serovar Typhimurium

FEMS microbiology letters, 2003-06, Vol.223 (2), p.281-286

2003

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Retron reverse transcriptase rrtT is ubiquitous in strains of Salmonella enterica serovar Typhimurium

FEMS microbiology letters, 2003-06, Vol.223 (2), p.281-286

2003

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Quantitative structure-function and structure-stability relationships of purposely modified proteins

Protein engineering, 1998-01, Vol.11 (1), p.21-30

Damborsky, J.

1998

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Insights into the Functional Architecture of the Catalytic Center of a Maize β-Glucosidase Zm-p60.11

Plant physiology (Bethesda), 2001-11, Vol.127 (3), p.973-985

2001

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CAVER Analyst 2.0: analysis and visualization of channels and tunnels in protein structures and molecular dynamics trajectories

CAVER Analyst 1.0: graphic tool for interactive visualization and analysis of tunnels and channels in protein structures

Gram-scale production of recombinant microbial enzymes in shake flasks

FireProtASR: A Web Server for Fully Automated Ancestral Sequence Reconstruction

Physiological and proteomic approaches to evaluate the role of sterol binding in elicitin-induced resistance

SoluProt: prediction of soluble protein expression in Escherichia coli

CaverDock: a molecular docking-based tool to analyse ligand transport through protein tunnels and channels

BenchStab: a tool for automated querying of web-based stability predictors

pyCaverDock: Python implementation of the popular tool for analysis of ligand transport with advanced caching and batch calculation support

FireProt 2.0: web-based platform for the fully automated design of thermostable proteins

PredictONCO: a web tool supporting decision-making in precision oncology by extending the bioinformatics predictions with advanced computing and machine learning

NewProt - a protein engineering portal

Analysis of the reaction mechanism and substrate specificity of haloalkane dehalogenases by sequential and structural comparisons

Insights into the Functional Architecture of the Catalytic Center of a Maize β-Glucosidase Zm-P60.1

TRITON: in silico construction of protein mutants and prediction of their activities

Insights into the functional architecture of the catalytic center of a maize (beta-glucosidase) Zm-p60.1

Retron reverse transcriptase rrtT is ubiquitous in strains of Salmonella enterica serovar Typhimurium

Retron reverse transcriptase rrtT is ubiquitous in strains of Salmonella enterica serovar Typhimurium

Quantitative structure-function and structure-stability relationships of purposely modified proteins

Insights into the Functional Architecture of the Catalytic Center of a Maize β-Glucosidase Zm-p60.11

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