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Towards the physical basis of how intrinsic disorder mediates protein function

Archives of biochemistry and biophysics, 2012-08, Vol.524 (2), p.123-131

Chen, Jianhan

2012

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Intrinsically Disordered p53 Extreme C-Terminus Binds to S100B(ββ) through “Fly-Casting”

Journal of the American Chemical Society, 2009-02, Vol.131 (6), p.2088-2089

Chen, Jianhan

2009

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Hydrophobic gating in BK channels

Nature communications, 2018-08, Vol.9 (1), p.3408-8, Article 3408

2018

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Residual Structure Accelerates Binding of Intrinsically Disordered ACTR by Promoting Efficient Folding upon Encounter

Journal of molecular biology, 2019-01, Vol.431 (2), p.422-432

2019

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Multiscale enhanced sampling of intrinsically disordered protein conformations

Journal of computational chemistry, 2016-03, Vol.37 (6), p.550-557

2016

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HyRes: a coarse-grained model for multi-scale enhanced sampling of disordered protein conformations

Physical chemistry chemical physics : PCCP, 2017, Vol.19 (48), p.32421-32432

2017

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Bioinspired bio-voltage memristors

Nature communications, 2020-04, Vol.11 (1), p.1861-10, Article 1861

2020

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Different Anomeric Sugar Bound States of Maltose Binding Protein Resolved by a Cytolysin A Nanopore Tweezer

ACS nano, 2020-02, Vol.14 (2), p.1727-1737

2020

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Topology-based modeling of intrinsically disordered proteins: Balancing intrinsic folding and intermolecular interactions

Proteins, structure, function, and bioinformatics, 2011-04, Vol.79 (4), p.1251-1266

2011

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Electrostatically accelerated encounter and folding for facile recognition of intrinsically disordered proteins

PLoS computational biology, 2013-11, Vol.9 (11), p.e1003363-e1003363

2013

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Modulation of the disordered conformational ensembles of the p53 transactivation domain by cancer-associated mutations

PLoS computational biology, 2015-04, Vol.11 (4), p.e1004247-e1004247

2015

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Atomistic Details of the Disordered States of KID and pKID. Implications in Coupled Binding and Folding

Journal of the American Chemical Society, 2009-04, Vol.131 (14), p.5214-5223

2009

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EGCG binds intrinsically disordered N-terminal domain of p53 and disrupts p53-MDM2 interaction

Nature communications, 2021-02, Vol.12 (1), p.986-11, Article 986

2021

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Targeting Intrinsically Disordered Proteins through Dynamic Interactions

Biomolecules (Basel, Switzerland), 2020-05, Vol.10 (5), p.743

2020

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Hydrophobic gating in bundle-crossing ion channels: a case study of TRPV4

Communications biology, 2023-10, Vol.6 (1), p.1094-1094, Article 1094

2023

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An inner activation gate controls TMEM16F phospholipid scrambling

Nature communications, 2019-04, Vol.10 (1), p.1846-13, Article 1846

2019

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Machine Learning Generation of Dynamic Protein Conformational Ensembles

Molecules (Basel, Switzerland), 2023-05, Vol.28 (10), p.4047

2023

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Residual structures, conformational fluctuations, and electrostatic interactions in the synergistic folding of two intrinsically disordered proteins

PLoS computational biology, 2012-01, Vol.8 (1), p.e1002353-e1002353

2012

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Recent advances in implicit solvent-based methods for biomolecular simulations

Current opinion in structural biology, 2008-04, Vol.18 (2), p.140-148

2008

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Structural basis for hyperpolarization-dependent opening of human HCN1 channel

Nature communications, 2024-06, Vol.15 (1), p.5216-13

2024

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Physics-based modeling provides predictive understanding of selectively promiscuous substrate binding by Hsp70 chaperones

PLoS computational biology, 2021-11, Vol.17 (11), p.e1009567-e1009567

2021

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Advanced Sampling Methods for Multiscale Simulation of Disordered Proteins and Dynamic Interactions

Biomolecules (Basel, Switzerland), 2021-09, Vol.11 (10), p.1416

2021

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Balancing Solvation and Intramolecular Interactions: Toward a Consistent Generalized Born Force Field

Journal of the American Chemical Society, 2006-03, Vol.128 (11), p.3728-3736

2006

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Dynamics of the BH3-Only Protein Binding Interface of Bcl-xL

Biophysical journal, 2015-09, Vol.109 (5), p.1049-1057

2015

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Implicit modeling of nonpolar solvation for simulating protein folding and conformational transitions

Physical chemistry chemical physics : PCCP, 2008-01, Vol.10 (4), p.471-481

2008

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Towards the physical basis of how intrinsic disorder mediates protein function

Intrinsically Disordered p53 Extreme C-Terminus Binds to S100B(ββ) through “Fly-Casting”

Hydrophobic gating in BK channels

Residual Structure Accelerates Binding of Intrinsically Disordered ACTR by Promoting Efficient Folding upon Encounter

Multiscale enhanced sampling of intrinsically disordered protein conformations

HyRes: a coarse-grained model for multi-scale enhanced sampling of disordered protein conformations

Bioinspired bio-voltage memristors

Different Anomeric Sugar Bound States of Maltose Binding Protein Resolved by a Cytolysin A Nanopore Tweezer

Topology-based modeling of intrinsically disordered proteins: Balancing intrinsic folding and intermolecular interactions

Electrostatically accelerated encounter and folding for facile recognition of intrinsically disordered proteins

Modulation of the disordered conformational ensembles of the p53 transactivation domain by cancer-associated mutations

Atomistic Details of the Disordered States of KID and pKID. Implications in Coupled Binding and Folding

EGCG binds intrinsically disordered N-terminal domain of p53 and disrupts p53-MDM2 interaction

Targeting Intrinsically Disordered Proteins through Dynamic Interactions

Hydrophobic gating in bundle-crossing ion channels: a case study of TRPV4

An inner activation gate controls TMEM16F phospholipid scrambling

Machine Learning Generation of Dynamic Protein Conformational Ensembles

Residual structures, conformational fluctuations, and electrostatic interactions in the synergistic folding of two intrinsically disordered proteins

Recent advances in implicit solvent-based methods for biomolecular simulations

Structural basis for hyperpolarization-dependent opening of human HCN1 channel

Physics-based modeling provides predictive understanding of selectively promiscuous substrate binding by Hsp70 chaperones

Advanced Sampling Methods for Multiscale Simulation of Disordered Proteins and Dynamic Interactions

Balancing Solvation and Intramolecular Interactions: Toward a Consistent Generalized Born Force Field

Dynamics of the BH3-Only Protein Binding Interface of Bcl-xL

Implicit modeling of nonpolar solvation for simulating protein folding and conformational transitions

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