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Biopython: freely available Python tools for computational molecular biology and bioinformatics

Bioinformatics, 2009-06, Vol.25 (11), p.1422-1423

2009

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Dissecting the Heterogeneity of Skin Gene Expression Patterns in Systemic Sclerosis

Arthritis & rheumatology (Hoboken, N.J.), 2015-11, Vol.67 (11), p.3016-3026

2015

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Oncogenic pathway signatures in human cancers as a guide to targeted therapies

Nature, 2006-01, Vol.439 (7074), p.353-357

2006

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Lipin‐1 regulation of phospholipid synthesis maintains endoplasmic reticulum homeostasis and is critical for triple‐negative breast cancer cell survival

The FASEB journal, 2017-07, Vol.31 (7), p.2893-2904

2017

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A Dynamic Bronchial Airway Gene Expression Signature of Chronic Obstructive Pulmonary Disease and Lung Function Impairment

American journal of respiratory and critical care medicine, 2013-05, Vol.187 (9), p.933-942

2013

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Deriving transcriptional programs and functional processes from gene expression databases

Bioinformatics (Oxford, England), 2012-04, Vol.28 (8), p.1122-1129

CHANG, Jeffrey T

2012

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A method of sample-wise region-set enrichment analysis for DNA methylomics

Epigenomics, 2021-07, Vol.13 (14), p.1081-1093

2021

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GATHER: a systems approach to interpreting genomic signatures

Bioinformatics, 2006-12, Vol.22 (23), p.2926-2933

2006

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The PDZ Domain Protein SYNJ2BP Regulates GRK-Dependent Sst2A Phosphorylation and Downstream MAPK Signaling

Endocrinology (Philadelphia), 2021-02, Vol.162 (2), p.1

2021

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MiR-26 down-regulates TNF-α/NF-κB signalling and IL-6 expression by silencing HMGA1 and MALT1

Nucleic acids research, 2016-05, Vol.44 (8), p.3772

2016

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Methodological Advancements for Investigating Intra-tumoral Heterogeneity in Breast Cancer at the Bench and Bedside

Journal of mammary gland biology and neoplasia, 2020-12, Vol.25 (4), p.289-304

2020

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p38 MAPK inhibits breast cancer metastasis through regulation of stromal expansion

International journal of cancer, 2015-01, Vol.136 (1), p.34-43

2015

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Phospholipase C Beta 1: a Candidate Signature Gene for Proneural Subtype High-Grade Glioma

Molecular neurobiology, 2016-11, Vol.53 (9), p.6511-6525

2016

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Knowledge-based classification of fine-grained immune cell types in single-cell RNA-Seq data

Briefings in bioinformatics, 2021-09, Vol.22 (5)

2021

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Euglycemia Restoration by Central Leptin in Type 1 Diabetes Requires STAT3 Signaling but Not Fast-Acting Neurotransmitter Release

Diabetes (New York, N.Y.), 2016-04, Vol.65 (4), p.1040-1049

2016

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Functional genomics identifies five distinct molecular subtypes with clinical relevance and pathways for growth control in epithelial ovarian cancer

EMBO molecular medicine, 2013-07, Vol.5 (7), p.1051-1066

2013

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The transcription and expression profile of p53N236S mutant reveals new aspects of gain of function for mutant p53

FEBS letters, 2018-09, Vol.592 (18), p.3183-3197

2018

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The transcription and expression profile of p53 N236S mutant reveals new aspects of gain of function for mutant p53

FEBS letters, 2018-09, Vol.592 (18), p.3183-3197

2018

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ω-3 polyunsaturated fatty acids direct differentiation of the membrane phenotype in mesenchymal stem cells to potentiate osteogenesis

Science advances, 2017-11, Vol.3 (11), p.eaao1193-eaao1193

2017

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Identification of a Novel Coregulator, SH3YL1, That Interacts With the Androgen Receptor N-Terminus

Molecular endocrinology (Baltimore, Md.), 2015-10, Vol.29 (10), p.1426-1439

2015

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Creating an online dictionary of abbreviations from MEDLINE

Journal of the American Medical Informatics Association : JAMIA, 2002-11, Vol.9 (6), p.612-620

2002

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Genomic classification of the RAS network identifies a personalized treatment strategy for lung cancer

Molecular oncology, 2014-10, Vol.8 (7), p.1339-1354

2014

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GAPSCORE: finding gene and protein names one word at a time

Bioinformatics, 2004-01, Vol.20 (2), p.216-225

2004

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Resistance to neoadjuvant chemotherapy in triple-negative breast cancer mediated by a reversible drug-tolerant state

Biopython: freely available Python tools for computational molecular biology and bioinformatics

Dissecting the Heterogeneity of Skin Gene Expression Patterns in Systemic Sclerosis

Oncogenic pathway signatures in human cancers as a guide to targeted therapies

Lipin‐1 regulation of phospholipid synthesis maintains endoplasmic reticulum homeostasis and is critical for triple‐negative breast cancer cell survival

A Dynamic Bronchial Airway Gene Expression Signature of Chronic Obstructive Pulmonary Disease and Lung Function Impairment

Deriving transcriptional programs and functional processes from gene expression databases

A method of sample-wise region-set enrichment analysis for DNA methylomics

GATHER: a systems approach to interpreting genomic signatures

The PDZ Domain Protein SYNJ2BP Regulates GRK-Dependent Sst2A Phosphorylation and Downstream MAPK Signaling

MiR-26 down-regulates TNF-α/NF-κB signalling and IL-6 expression by silencing HMGA1 and MALT1

Methodological Advancements for Investigating Intra-tumoral Heterogeneity in Breast Cancer at the Bench and Bedside

p38 MAPK inhibits breast cancer metastasis through regulation of stromal expansion

Phospholipase C Beta 1: a Candidate Signature Gene for Proneural Subtype High-Grade Glioma

Knowledge-based classification of fine-grained immune cell types in single-cell RNA-Seq data

Euglycemia Restoration by Central Leptin in Type 1 Diabetes Requires STAT3 Signaling but Not Fast-Acting Neurotransmitter Release

Functional genomics identifies five distinct molecular subtypes with clinical relevance and pathways for growth control in epithelial ovarian cancer

The transcription and expression profile of p53N236S mutant reveals new aspects of gain of function for mutant p53

The transcription and expression profile of p53 N236S mutant reveals new aspects of gain of function for mutant p53

ω-3 polyunsaturated fatty acids direct differentiation of the membrane phenotype in mesenchymal stem cells to potentiate osteogenesis

Targeting chemotherapy resistance in mesenchymal triple-negative breast cancer: a phase II trial of neoadjuvant angiogenic and mTOR inhibition with chemotherapy

Identification of a Novel Coregulator, SH3YL1, That Interacts With the Androgen Receptor N-Terminus

Creating an online dictionary of abbreviations from MEDLINE

Genomic classification of the RAS network identifies a personalized treatment strategy for lung cancer

GAPSCORE: finding gene and protein names one word at a time

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