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Toward dynamic structural biology: Two decades of single-molecule Förster resonance energy transfer

Science (American Association for the Advancement of Science), 2018-01, Vol.359 (6373)

2018

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Systematic Assessment of Burst Impurity in Confocal-Based Single-Molecule Fluorescence Detection Using Brownian Motion Simulations

Molecules (Basel, Switzerland), 2019-07, Vol.24 (14), p.2557

2019

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FRETBursts: An Open Source Toolkit for Analysis of Freely-Diffusing Single-Molecule FRET

PloS one, 2016-08, Vol.11 (8), p.e0160716-e0160716

2016

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Multi-parameter photon-by-photon hidden Markov modeling

Nature communications, 2022-02, Vol.13 (1), p.1000-1000, Article 1000

2022

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Identification and quantification of within-burst dynamics in singly labeled single-molecule fluorescence lifetime experiments

Biophysical reports, 2022-09, Vol.2 (3), p.100071, Article 100071

2022

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Förster resonance energy transfer and protein-induced fluorescence enhancement as synergetic multi-scale molecular rulers

Scientific reports, 2016-09, Vol.6 (1), p.33257-33257, Article 33257

2016

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Evidence for a compact σ70 conformation in vitro and in vivo

iScience, 2024-06, Vol.27 (6), p.110140, Article 110140

2024

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Fluorescent protein lifetimes report densities and phases of nuclear condensates during embryonic stem-cell differentiation

Nature communications, 2023-08, Vol.14 (1), p.4885-4885, Article 4885

2023

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Multispot single-molecule FRET: High-throughput analysis of freely diffusing molecules

PloS one, 2017-04, Vol.12 (4), p.e0175766-e0175766

2017

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Multiple conformations of full-length p53 detected with single-molecule fluorescence resonance energy transfer

Proceedings of the National Academy of Sciences - PNAS, 2009-12, Vol.106 (49), p.20758-20763

2009

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Fretsael microscopy—localizing biomolecular interactions at nanometer accuracy using confocal microscopy and simple dyes

Biophysical journal, 2024-02, Vol.123 (3), p.30a-30a

2024

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Utilizing Time-Resolved Protein-Induced Fluorescence Enhancement to Identify Stable Local Conformations One α-Synuclein Monomer at a Time

Journal of visualized experiments, 2021-05 (171)

2021

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Different types of pausing modes during transcription initiation

Transcription, 2017-08, Vol.8 (4), p.242-253

2017

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The influence of PEG crowding on mCherry dynamics, disorder, and structure

Biophysical journal, 2024-02, Vol.123 (3), p.193a-193a

2024

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Disentangling conformational and photophysical dynamics in single-molecule FRET and PIFE experiments with multiparameter photon-by-photon hidden Markov modeling

Biophysical journal, 2024-02, Vol.123 (3), p.287a-287a

2024

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The structural heterogeneity of α-synuclein is governed by several distinct subpopulations with interconversion times slower than milliseconds

Structure (London), 2021-09, Vol.29 (9), p.1048-1064.e6

2021

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Structure-function relationship of an unstructured protein: α-synuclein

Biophysical journal, 2022-02, Vol.121 (3), p.40a-40a

2022

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Structural and dynamic insights into α-synuclein dimer conformations

Structure (London), 2023-04, Vol.31 (4), p.411-423.e6

2023

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A novel single molecule fluorescence quenching technique for measuring distances below 3 nm

Biophysical journal, 2022-02, Vol.121 (3), p.431a-431a

2022

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Backtracked and paused transcription initiation intermediate of Escherichia coli RNA polymerase

Proceedings of the National Academy of Sciences - PNAS, 2016-10, Vol.113 (43), p.E6562-E6571

2016

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A folding transition underlies the emergence of membrane affinity in amyloid-β

Physical chemistry chemical physics : PCCP, 2013-11, Vol.15 (44), p.19129-19133

2013

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Studying transcription initiation by RNA polymerase with diffusion‐based single‐molecule fluorescence

Protein science, 2017-07, Vol.26 (7), p.1278-1290

2017

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Single-Molecule Measurement of Membrane Protein Stability

Biophysical journal, 2016-02, Vol.110 (3), p.396a-396a

2016

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A Multispot Confocal Platform for High-Throughput Freely Diffusing Single-Molecule FRET Studies

Biophysical journal, 2016-02, Vol.110 (3), p.194a-195a

2016

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E.Coli RNA Polymerase Activity under Crowding

Biophysical journal, 2016-02, Vol.110 (3), p.231a-231a

2016

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Toward dynamic structural biology: Two decades of single-molecule Förster resonance energy transfer

Systematic Assessment of Burst Impurity in Confocal-Based Single-Molecule Fluorescence Detection Using Brownian Motion Simulations

FRETBursts: An Open Source Toolkit for Analysis of Freely-Diffusing Single-Molecule FRET

Multi-parameter photon-by-photon hidden Markov modeling

Identification and quantification of within-burst dynamics in singly labeled single-molecule fluorescence lifetime experiments

Förster resonance energy transfer and protein-induced fluorescence enhancement as synergetic multi-scale molecular rulers

Evidence for a compact σ70 conformation in vitro and in vivo

Fluorescent protein lifetimes report densities and phases of nuclear condensates during embryonic stem-cell differentiation

Multispot single-molecule FRET: High-throughput analysis of freely diffusing molecules

Multiple conformations of full-length p53 detected with single-molecule fluorescence resonance energy transfer

Fretsael microscopy—localizing biomolecular interactions at nanometer accuracy using confocal microscopy and simple dyes

Utilizing Time-Resolved Protein-Induced Fluorescence Enhancement to Identify Stable Local Conformations One α-Synuclein Monomer at a Time

Different types of pausing modes during transcription initiation

The influence of PEG crowding on mCherry dynamics, disorder, and structure

Disentangling conformational and photophysical dynamics in single-molecule FRET and PIFE experiments with multiparameter photon-by-photon hidden Markov modeling

The structural heterogeneity of α-synuclein is governed by several distinct subpopulations with interconversion times slower than milliseconds

Structure-function relationship of an unstructured protein: α-synuclein

Structural and dynamic insights into α-synuclein dimer conformations

A novel single molecule fluorescence quenching technique for measuring distances below 3 nm

Backtracked and paused transcription initiation intermediate of Escherichia coli RNA polymerase

A folding transition underlies the emergence of membrane affinity in amyloid-β

Studying transcription initiation by RNA polymerase with diffusion‐based single‐molecule fluorescence

Single-Molecule Measurement of Membrane Protein Stability

A Multispot Confocal Platform for High-Throughput Freely Diffusing Single-Molecule FRET Studies

E.Coli RNA Polymerase Activity under Crowding

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