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In silico fragmentation for computer assisted identification of metabolite mass spectra

BMC bioinformatics, 2010-03, Vol.11 (1), p.148-148, Article 148

2010

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CUDASW++ 3.0: accelerating Smith-Waterman protein database search by coupling CPU and GPU SIMD instructions

BMC bioinformatics, 2013-04, Vol.14 (1), p.117-117, Article 117

2013

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SeqAn an efficient, generic C++ library for sequence analysis

BMC bioinformatics, 2008-01, Vol.9 (1), p.11-11, Article 11

2008

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Parallelized short read assembly of large genomes using de Bruijn graphs

BMC bioinformatics, 2011-08, Vol.12 (1), p.354-354, Article 354

2011

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NOXclass: prediction of protein-protein interaction types

BMC bioinformatics, 2006-01, Vol.7 (1), p.27-27, Article 27

2006

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miRSel: automated extraction of associations between microRNAs and genes from the biomedical literature

BMC bioinformatics, 2010-03, Vol.11 (1), p.135-135, Article 135

2010

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Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models

BMC bioinformatics, 2006-03, Vol.7 (1), p.142-142, Article 142

2006

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F2C2: a fast tool for the computation of flux coupling in genome-scale metabolic networks

BMC bioinformatics, 2012-04, Vol.13 (1), p.57-57, Article 57

2012

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Scipio: using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related species

BMC bioinformatics, 2008-06, Vol.9 (1), p.278-278, Article 278

2008

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Computing H/D-exchange rates of single residues from data of proteolytic fragments

BMC bioinformatics, 2010-08, Vol.11 (1), p.424-424, Article 424

2010

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Highlights from the tenth ISCB Student Council Symposium 2014

BMC bioinformatics, 2015-01, Vol.16 Suppl 2 (S2), p.A1-10, Article A1

2015

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CELDA -- an ontology for the comprehensive representation of cells in complex systems

BMC bioinformatics, 2013-07, Vol.14 (1), p.228-228, Article 228

2013

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DIALIGN-T: an improved algorithm for segment-based multiple sequence alignment

BMC bioinformatics, 2005-03, Vol.6 (1), p.66-66, Article 66

2005

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Isotope pattern deconvolution for peptide mass spectrometry by non-negative least squares/least absolute deviation template matching

BMC bioinformatics, 2012-11, Vol.13 (1), p.291-291, Article 291

2012

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FFCA: a feasibility-based method for flux coupling analysis of metabolic networks

BMC bioinformatics, 2011-06, Vol.12 (1), p.236-236, Article 236

2011

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FERN - a Java framework for stochastic simulation and evaluation of reaction networks

BMC bioinformatics, 2008-08, Vol.9 (1), p.356-356, Article 356

2008

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Influence of degree correlations on network structure and stability in protein-protein interaction networks

BMC bioinformatics, 2007-08, Vol.8 (1), p.297-297, Article 297

2007

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Highlights from the ISCB Student Council Symposium 2013

BMC bioinformatics, 2014-02, Vol.15 (S3), p.A1-A1, Article A1

2014

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Impact of residue accessible surface area on the prediction of protein secondary structures

BMC bioinformatics, 2008-08, Vol.9 (1), p.357-357, Article 357

2008

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Enhancing navigation in biomedical databases by community voting and database-driven text classification

BMC bioinformatics, 2009-10, Vol.10 (1), p.317-317, Article 317

2009

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Gene and protein nomenclature in public databases

BMC bioinformatics, 2006-08, Vol.7 (1), p.372-372, Article 372

2006

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Simplifying gene trees for easier comprehension

BMC bioinformatics, 2006-04, Vol.7 (1), p.231-231, Article 231

2006

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A simple approach for protein name identification: prospects and limits

BMC bioinformatics, 2005-05, Vol.6 Suppl 1 (S1), p.S15-S15, Article S15

2005

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Inferring topology from clustering coefficients in protein-protein interaction networks

BMC bioinformatics, 2006-11, Vol.7 (1), p.519-519, Article 519

2006

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Detection of viral sequence fragments of HIV-1 subfamilies yet unknown

BMC bioinformatics, 2011-04, Vol.12 (1), p.93-93, Article 93

2011

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In silico fragmentation for computer assisted identification of metabolite mass spectra

CUDASW++ 3.0: accelerating Smith-Waterman protein database search by coupling CPU and GPU SIMD instructions

SeqAn an efficient, generic C++ library for sequence analysis

Parallelized short read assembly of large genomes using de Bruijn graphs

NOXclass: prediction of protein-protein interaction types

miRSel: automated extraction of associations between microRNAs and genes from the biomedical literature

Score-based prediction of genomic islands in prokaryotic genomes using hidden Markov models

F2C2: a fast tool for the computation of flux coupling in genome-scale metabolic networks

Scipio: using protein sequences to determine the precise exon/intron structures of genes and their orthologs in closely related species

Computing H/D-exchange rates of single residues from data of proteolytic fragments

Highlights from the tenth ISCB Student Council Symposium 2014

CELDA -- an ontology for the comprehensive representation of cells in complex systems

DIALIGN-T: an improved algorithm for segment-based multiple sequence alignment

Isotope pattern deconvolution for peptide mass spectrometry by non-negative least squares/least absolute deviation template matching

FFCA: a feasibility-based method for flux coupling analysis of metabolic networks

FERN - a Java framework for stochastic simulation and evaluation of reaction networks

Influence of degree correlations on network structure and stability in protein-protein interaction networks

Highlights from the ISCB Student Council Symposium 2013

Impact of residue accessible surface area on the prediction of protein secondary structures

Enhancing navigation in biomedical databases by community voting and database-driven text classification

Gene and protein nomenclature in public databases

Simplifying gene trees for easier comprehension

A simple approach for protein name identification: prospects and limits

Inferring topology from clustering coefficients in protein-protein interaction networks

Detection of viral sequence fragments of HIV-1 subfamilies yet unknown

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