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Fast and Accurate Estimation of Species-Specific Diversification Rates Using Data Augmentation

Systematic biology, 2022-02, Vol.71 (2), p.353-366

2022

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Understanding the effect of competition during evolutionary radiations: an integrated model of phenotypic and species diversification

Ecology letters, 2019-12, Vol.22 (12), p.2006-2017

2019

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Detecting Environment-Dependent Diversification From Phylogenies: A Simulation Study and Some Empirical Illustrations

Systematic biology, 2018-07, Vol.67 (4), p.576-593

2018

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Deep Learning from Phylogenies for Diversification Analyses

Systematic biology, 2023-12, Vol.72 (6), p.1262-1279

2023

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Distinguishing Cophylogenetic Signal from Phylogenetic Congruence Clarifies the Interplay Between Evolutionary History and Species Interactions

Systematic biology, 2024-09, Vol.73 (3), p.613-622

2024

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Estimating the Effect of Competition on Trait Evolution Using Maximum Likelihood Inference

Systematic biology, 2016-07, Vol.65 (4), p.700-710

2016

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The ClaDS rate-heterogeneous birth-death prior for full phylogenetic inference in BEAST2

Systematic biology, 2023-11, Vol.72 (5), p.1180-1187

2023

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An individual‐based model for the eco‐evolutionary emergence of bipartite interaction networks

Ecology letters, 2020-11, Vol.23 (11), p.1623-1634

2020

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Testing Convergence Versus History: Convergence Dominates Phenotypic Evolution for over 150 Million Years in Frogs

Systematic biology, 2016-01, Vol.65 (1), p.146-160

2016

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Model-Based Inference of Punctuated Molecular Evolution

Molecular biology and evolution, 2020-11, Vol.37 (11), p.3308-3323

2020

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Comparing different computational approaches for detecting long‐term vertical transmission in host‐associated microbiota

Molecular ecology, 2023-12, Vol.32 (23), p.6671-6685

2023

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Detecting the ecological footprint of selection

PloS one, 2024-06, Vol.19 (6), p.e0302794

2024

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Microbial Cooperative Warfare

Science (American Association for the Advancement of Science), 2012-09, Vol.337 (6099), p.1184-1185

Morlon, Hélène

2012

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Picante: R tools for integrating phylogenies and ecology

Bioinformatics, 2010-06, Vol.26 (11), p.1463-1464

2010

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Fossil-based comparative analyses reveal ancient marine ancestry erased by extinction in ray-finned fishes

Ecology letters, 2015-05, Vol.18 (5), p.441-450

2015

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Characterizing and Comparing Phylogenetic Trait Data from Their Normalized Laplacian Spectrum

Systematic biology, 2020-03, Vol.69 (2), p.234-248

2020

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Phylogenetic Comparative Approach Reveals Evolutionary Conservatism, Ancestral Composition, and Integration of Vertebrate Gut Microbiota

Molecular biology and evolution, 2023-07, Vol.40 (7)

2023

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Global drivers of eukaryotic plankton biogeography in the sunlit ocean

Science (American Association for the Advancement of Science), 2021-10, Vol.374 (6567), p.594-599

2021

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A broadscale analysis of host‐symbiont cophylogeny reveals the drivers of phylogenetic congruence

Ecology letters, 2021-08, Vol.24 (8), p.1681-1696

2021

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Abiotic stress tolerance and competition‐related traits underlie phylogenetic clustering in soil bacterial communities

Ecology letters, 2014-10, Vol.17 (10), p.1191-1201

2014

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Climate-driven extinctions shape the phylogenetic structure of temperate tree floras

Ecology letters, 2015-03, Vol.18 (3), p.263-272

2015

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Coming of age for COI metabarcoding of whole organism community DNA: Towards bioinformatic harmonisation

Molecular ecology resources, 2022-04, Vol.22 (3), p.847-861

2022

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Characterizing symbiont inheritance during host–microbiota evolution: Application to the great apes gut microbiota

Molecular ecology resources, 2019-11, Vol.19 (6), p.1659-1671

2019

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Cichlid species‐area relationships are shaped by adaptive radiations that scale with area

Ecology letters, 2014-05, Vol.17 (5), p.583-592

2014

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Reliable Phylogenetic Regressions for Multivariate Comparative Data: Illustration with the MANOVA and Application to the Effect of Diet on Mandible Morphology in Phyllostomid Bats

Systematic biology, 2020-09, Vol.69 (5), p.927-943

2020

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Fast and Accurate Estimation of Species-Specific Diversification Rates Using Data Augmentation

Understanding the effect of competition during evolutionary radiations: an integrated model of phenotypic and species diversification

Detecting Environment-Dependent Diversification From Phylogenies: A Simulation Study and Some Empirical Illustrations

Deep Learning from Phylogenies for Diversification Analyses

Distinguishing Cophylogenetic Signal from Phylogenetic Congruence Clarifies the Interplay Between Evolutionary History and Species Interactions

Estimating the Effect of Competition on Trait Evolution Using Maximum Likelihood Inference

The ClaDS rate-heterogeneous birth-death prior for full phylogenetic inference in BEAST2

An individual‐based model for the eco‐evolutionary emergence of bipartite interaction networks

Testing Convergence Versus History: Convergence Dominates Phenotypic Evolution for over 150 Million Years in Frogs

Model-Based Inference of Punctuated Molecular Evolution

Comparing different computational approaches for detecting long‐term vertical transmission in host‐associated microbiota

Detecting the ecological footprint of selection

Microbial Cooperative Warfare

Picante: R tools for integrating phylogenies and ecology

Fossil-based comparative analyses reveal ancient marine ancestry erased by extinction in ray-finned fishes

Characterizing and Comparing Phylogenetic Trait Data from Their Normalized Laplacian Spectrum

Phylogenetic Comparative Approach Reveals Evolutionary Conservatism, Ancestral Composition, and Integration of Vertebrate Gut Microbiota

Global drivers of eukaryotic plankton biogeography in the sunlit ocean

A broadscale analysis of host‐symbiont cophylogeny reveals the drivers of phylogenetic congruence

Abiotic stress tolerance and competition‐related traits underlie phylogenetic clustering in soil bacterial communities

Climate-driven extinctions shape the phylogenetic structure of temperate tree floras

Coming of age for COI metabarcoding of whole organism community DNA: Towards bioinformatic harmonisation

Characterizing symbiont inheritance during host–microbiota evolution: Application to the great apes gut microbiota

Cichlid species‐area relationships are shaped by adaptive radiations that scale with area

Reliable Phylogenetic Regressions for Multivariate Comparative Data: Illustration with the MANOVA and Application to the Effect of Diet on Mandible Morphology in Phyllostomid Bats

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