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Software for systems biology: from tools to integrated platforms

Nature reviews. Genetics, 2011-12, Vol.12 (12), p.821

2011

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Potential Functional Restoration of Corneal Endothelial Cells in Fuchs Endothelial Corneal Dystrophy by ROCK Inhibitor (Ripasudil)

American journal of ophthalmology, 2021-04, Vol.224, p.185-199

2021

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G1/S cell cycle regulators mediate effects of circadian dysregulation on tumor growth and provide targets for timed anticancer treatment

PLoS biology, 2019-04, Vol.17 (4), p.e3000228-e3000228

2019

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ColonyArea: an ImageJ plugin to automatically quantify colony formation in clonogenic assays

PloS one, 2014-03, Vol.9 (3), p.e92444

2014

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Interplay of the serine/threonine-kinase StkP and the paralogs DivIVA and GpsB in pneumococcal cell elongation and division

PLoS genetics, 2014-04, Vol.10 (4), p.e1004275-e1004275

2014

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Phosphoglucomutase 1 inhibits hepatocellular carcinoma progression by regulating glucose trafficking

PLoS biology, 2018-10, Vol.16 (10), p.e2006483-e2006483

2018

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Gankyrin drives metabolic reprogramming to promote tumorigenesis, metastasis and drug resistance through activating β-catenin/c-Myc signaling in human hepatocellular carcinoma

Cancer letters, 2019-02, Vol.443, p.34-46

2019

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Aurora kinase A stabilizes FOXM1 to enhance paclitaxel resistance in triple‐negative breast cancer

Journal of cellular and molecular medicine, 2019-09, Vol.23 (9), p.6442-6453

2019

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ULK1-ATG13 and their mitotic phospho-regulation by CDK1 connect autophagy to cell cycle

PLoS biology, 2020-06, Vol.18 (6), p.e3000288

2020

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A map of protein dynamics during cell-cycle progression and cell-cycle exit

PLoS biology, 2017-09, Vol.15 (9), p.e2003268-e2003268

2017

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Resveratrol synergizes with cisplatin in antineoplastic effects against AGS gastric cancer cells by inducing endoplasmic reticulum stress‑mediated apoptosis and G2/M phase arrest

Oncology reports, 2020-10, Vol.44 (4), p.1605-1615

2020

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lncRNA CYTOR promotes tamoxifen resistance in breast cancer cells via sponging miR-125a-5p

International journal of molecular medicine, 2020-02, Vol.45 (2), p.497-509

2020

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Trichodermin Induces G0/G1 Cell Cycle Arrest by Inhibiting c-Myc in Ovarian Cancer Cells and Tumor Xenograft-Bearing Mice

International journal of molecular sciences, 2021-05, Vol.22 (9), p.5022

2021

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The effects of manipulating levels of replication initiation factors on origin firing efficiency in yeast

PLoS genetics, 2019-10, Vol.15 (10), p.e1008430

2019

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Molecular mechanism of Aurora A kinase autophosphorylation and its allosteric activation by TPX2

eLife, 2014-05, Vol.3, p.e02667-e02667

2014

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CD44 inhibition attenuates EGFR signaling and enhances cisplatin sensitivity in human EGFR wild‑type non‑small‑cell lung cancer cells

International journal of molecular medicine, 2020-06, Vol.45 (6), p.1783-1792

2020

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Resveratrol inhibits the progression of cervical cancer by suppressing the transcription and expression of HPV E6 and E7 genes

International journal of molecular medicine, 2021-01, Vol.47 (1), p.335-345

2021

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The chloroplast 2-cysteine peroxiredoxin functions as thioredoxin oxidase in redox regulation of chloroplast metabolism

eLife, 2018-10, Vol.7

2018

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A Cyclin A-Myb-MuvB-Aurora B network regulates the choice between mitotic cycles and polyploid endoreplication cycles

PLoS genetics, 2019-07, Vol.15 (7), p.e1008253-e1008253

2019

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Small molecule inhibition of polo-like kinase 1 by volasertib (BI 6727) causes significant melanoma growth delay and regression in vivo

Cancer letters, 2017-01, Vol.385, p.179-187

2017

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Cell Origin Dictates Programming of Resident versus Recruited Macrophages during Acute Lung Injury

American journal of respiratory cell and molecular biology, 2017-09, Vol.57 (3), p.294-306

2017

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High nuclear TPX2 expression correlates with TP53 mutation and poor clinical behavior in a large breast cancer cohort, but is not an independent predictor of chromosomal instability

BMC cancer, 2021-02, Vol.21 (1), p.186-186, Article 186

2021

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Single-cell sequencing reveals karyotype heterogeneity in murine and human malignancies

Genome Biology, 2016-05, Vol.17 (1), p.115-115, Article 115

2016

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BZU2/ZmMUTE controls symmetrical division of guard mother cell and specifies neighbor cell fate in maize

PLoS genetics, 2019-08, Vol.15 (8), p.e1008377-e1008377

2019

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Prognostic value of nuclear morphometry in myxoid liposarcoma

Cancer science, 2023-05, Vol.114 (5), p.2178-2188

2023

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Software for systems biology: from tools to integrated platforms

Potential Functional Restoration of Corneal Endothelial Cells in Fuchs Endothelial Corneal Dystrophy by ROCK Inhibitor (Ripasudil)

G1/S cell cycle regulators mediate effects of circadian dysregulation on tumor growth and provide targets for timed anticancer treatment

ColonyArea: an ImageJ plugin to automatically quantify colony formation in clonogenic assays

Interplay of the serine/threonine-kinase StkP and the paralogs DivIVA and GpsB in pneumococcal cell elongation and division

Phosphoglucomutase 1 inhibits hepatocellular carcinoma progression by regulating glucose trafficking

Gankyrin drives metabolic reprogramming to promote tumorigenesis, metastasis and drug resistance through activating β-catenin/c-Myc signaling in human hepatocellular carcinoma

Aurora kinase A stabilizes FOXM1 to enhance paclitaxel resistance in triple‐negative breast cancer

ULK1-ATG13 and their mitotic phospho-regulation by CDK1 connect autophagy to cell cycle

A map of protein dynamics during cell-cycle progression and cell-cycle exit

Resveratrol synergizes with cisplatin in antineoplastic effects against AGS gastric cancer cells by inducing endoplasmic reticulum stress‑mediated apoptosis and G2/M phase arrest

lncRNA CYTOR promotes tamoxifen resistance in breast cancer cells via sponging miR-125a-5p

Trichodermin Induces G0/G1 Cell Cycle Arrest by Inhibiting c-Myc in Ovarian Cancer Cells and Tumor Xenograft-Bearing Mice

The effects of manipulating levels of replication initiation factors on origin firing efficiency in yeast

Molecular mechanism of Aurora A kinase autophosphorylation and its allosteric activation by TPX2

CD44 inhibition attenuates EGFR signaling and enhances cisplatin sensitivity in human EGFR wild‑type non‑small‑cell lung cancer cells

Resveratrol inhibits the progression of cervical cancer by suppressing the transcription and expression of HPV E6 and E7 genes

The chloroplast 2-cysteine peroxiredoxin functions as thioredoxin oxidase in redox regulation of chloroplast metabolism

A Cyclin A-Myb-MuvB-Aurora B network regulates the choice between mitotic cycles and polyploid endoreplication cycles

Small molecule inhibition of polo-like kinase 1 by volasertib (BI 6727) causes significant melanoma growth delay and regression in vivo

Cell Origin Dictates Programming of Resident versus Recruited Macrophages during Acute Lung Injury

High nuclear TPX2 expression correlates with TP53 mutation and poor clinical behavior in a large breast cancer cohort, but is not an independent predictor of chromosomal instability

Single-cell sequencing reveals karyotype heterogeneity in murine and human malignancies

BZU2/ZmMUTE controls symmetrical division of guard mother cell and specifies neighbor cell fate in maize

Prognostic value of nuclear morphometry in myxoid liposarcoma

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