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A size‐modified poisson–boltzmann ion channel model in a solvent of multiple ionic species: Application to voltage‐dependent anion channel

Journal of computational chemistry, 2020-01, Vol.41 (3), p.218-230

2020

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Effects of ROS pathway inhibitors and NADH and FADH2 linked substrates on mitochondrial bioenergetics and ROS emission in the heart and kidney cortex and outer medulla

Archives of biochemistry and biophysics, 2023-08, Vol.744, p.109690-109690, Article 109690

2023

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Quantification of mitochondrial membrane potential in the isolated rat lung using rhodamine 6G

Journal of applied physiology (1985), 2020-04, Vol.128 (4), p.892-906

2020

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Assessing the degree of hepatic ischemia-reperfusion injury using physiologically based pharmacokinetic modeling of sodium fluorescein disposition in ex vivo machine-perfused livers

American journal of physiology: Gastrointestinal and liver physiology, 2024-09, Vol.327 (3), p.G424-G437

2024

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Substrate-dependent differential regulation of mitochondrial bioenergetics in the heart and kidney cortex and outer medulla

Biochimica et biophysica acta. Bioenergetics, 2022-02, Vol.1863 (2), p.148518-148518, Article 148518

2022

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Reverse Electron Transfer is a More Dominant Source of Mitochondrial ROS Production in the Heart and Kidney Outer Medulla than in the Kidney Cortex

The FASEB journal, 2022-05, Vol.36 (S1), p.n/a

2022

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In vivo Molecular Imaging Stratifies Rats with Different Susceptibilities to Hyperoxic Acute Lung Injury

The FASEB journal, 2022-05, Vol.36 (S1), p.n/a

2022

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Mechanistic computational modeling of the kinetics and regulation of NADPH oxidase 2 assembly and activation facilitating superoxide production

Free radical research, 2020-10, Vol.54 (10), p.695-721

2020

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Fluorescein Clearance Kinetics in Blood and Bile Indicates Hepatic Ischemia-Reperfusion Injury in Rats

American journal of physiology: Gastrointestinal and liver physiology, 2022-08, Vol.323 (2), p.G126-G133

2022

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Aortic Remodeling Kinetics in Response to Coarctation-Induced Mechanical Perturbations

Biomedicines, 2023-06, Vol.11 (7), p.1817

2023

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A thermodynamically-constrained mathematical model for the kinetics and regulation of NADPH oxidase 2 complex-mediated electron transfer and superoxide production

Free radical biology & medicine, 2019-04, Vol.134, p.581-597

2019

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Pharmacokinetics of 99mTc-HMPAO in isolated perfused rat lungs

Journal of applied physiology (1985), 2019-11, Vol.127 (5), p.1317-1327

2019

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BioModME for building and simulating dynamic computational models of complex biological systems

Bioinformatics advances, 2024, Vol.4 (1), p.vbae023-vbae023

2024

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Integrated Computational Model of Lung Tissue Bioenergetics

Frontiers in physiology, 2019-03, Vol.10, p.191-191

2019

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Computational Modeling of Substrate-Dependent Mitochondrial Respiration and Bioenergetics in the Heart and Kidney Cortex and Outer Medulla

Function (Oxford, England), 2023, Vol.4 (5), p.zqad038-zqad038

2023

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The Performance of Short-Term Heart Rate Variability in the Detection of Congestive Heart Failure

BioMed research international, 2016-01, Vol.2016 (2016), p.1-11

2016

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Quantifying mitochondrial and plasma membrane potentials in intact pulmonary arterial endothelial cells based on extracellular disposition of rhodamine dyes

American journal of physiology. Lung cellular and molecular physiology, 2011-05, Vol.300 (5), p.L762-L772

2011

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Stent design properties and deployment ratio influence indexes of wall shear stress: a three-dimensional computational fluid dynamics investigation within a normal artery

Journal of applied physiology (1985), 2004-07, Vol.97 (1), p.424-430

2004

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A Computational Model for Investigating Tumor Apoptosis Induced by Mesenchymal Stem Cell-Derived Secretome

Computational and mathematical methods in medicine, 2016-01, Vol.2016 (2016), p.1-17

2016

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Integration of a Random‐Rapid‐Equilibrium Binding Model of NOX2 Assembly with a Five‐State Rate‐Limiting Model of NOX2 Electron Flow facilitating Superoxide Production

The FASEB journal, 2021-05, Vol.35 (S1), p.n/a, Article fasebj.2021.35.S1.01879

2021

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Hypoxia preconditioning increases survival and decreases expression of Toll-like receptor 4 in pulmonary artery endothelial cells exposed to lipopolysaccharide

Pulmonary circulation, 2013-09, Vol.3 (3), p.578-588

2013

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Sex-Specific Mitochondrial Bioenergetics Differences in Heart and Kidney Cortex

Physiology (Bethesda, Md.), 2024-05, Vol.39 (S1)

2024

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Computational Modeling of Sodium Fluorescein Disposition in E x Vivo, Machine-Perfused Livers with Ischemia-Reperfusion Injury

Physiology (Bethesda, Md.), 2024-05, Vol.39 (S1)

2024

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Mitochondrial function in lungs of rats with different susceptibilities to hyperoxia-induced Acute Respiratory Distress Syndrome (ARDS)

Physiology (Bethesda, Md.), 2024-05, Vol.39 (S1)

2024

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Altered Hepatic Mitochondrial Bioenergetics and Oxidant Emission with Ischemia and Reperfusion

Physiology (Bethesda, Md.), 2024-05, Vol.39 (S1)

2024

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A size‐modified poisson–boltzmann ion channel model in a solvent of multiple ionic species: Application to voltage‐dependent anion channel

Effects of ROS pathway inhibitors and NADH and FADH2 linked substrates on mitochondrial bioenergetics and ROS emission in the heart and kidney cortex and outer medulla

Quantification of mitochondrial membrane potential in the isolated rat lung using rhodamine 6G

Assessing the degree of hepatic ischemia-reperfusion injury using physiologically based pharmacokinetic modeling of sodium fluorescein disposition in ex vivo machine-perfused livers

Substrate-dependent differential regulation of mitochondrial bioenergetics in the heart and kidney cortex and outer medulla

Reverse Electron Transfer is a More Dominant Source of Mitochondrial ROS Production in the Heart and Kidney Outer Medulla than in the Kidney Cortex

In vivo Molecular Imaging Stratifies Rats with Different Susceptibilities to Hyperoxic Acute Lung Injury

Mechanistic computational modeling of the kinetics and regulation of NADPH oxidase 2 assembly and activation facilitating superoxide production

Fluorescein Clearance Kinetics in Blood and Bile Indicates Hepatic Ischemia-Reperfusion Injury in Rats

Aortic Remodeling Kinetics in Response to Coarctation-Induced Mechanical Perturbations

A thermodynamically-constrained mathematical model for the kinetics and regulation of NADPH oxidase 2 complex-mediated electron transfer and superoxide production

Pharmacokinetics of 99mTc-HMPAO in isolated perfused rat lungs

BioModME for building and simulating dynamic computational models of complex biological systems

Integrated Computational Model of Lung Tissue Bioenergetics

Computational Modeling of Substrate-Dependent Mitochondrial Respiration and Bioenergetics in the Heart and Kidney Cortex and Outer Medulla

The Performance of Short-Term Heart Rate Variability in the Detection of Congestive Heart Failure

Quantifying mitochondrial and plasma membrane potentials in intact pulmonary arterial endothelial cells based on extracellular disposition of rhodamine dyes

Stent design properties and deployment ratio influence indexes of wall shear stress: a three-dimensional computational fluid dynamics investigation within a normal artery

A Computational Model for Investigating Tumor Apoptosis Induced by Mesenchymal Stem Cell-Derived Secretome

Integration of a Random‐Rapid‐Equilibrium Binding Model of NOX2 Assembly with a Five‐State Rate‐Limiting Model of NOX2 Electron Flow facilitating Superoxide Production

Hypoxia preconditioning increases survival and decreases expression of Toll-like receptor 4 in pulmonary artery endothelial cells exposed to lipopolysaccharide

Sex-Specific Mitochondrial Bioenergetics Differences in Heart and Kidney Cortex

Computational Modeling of Sodium Fluorescein Disposition in E x Vivo, Machine-Perfused Livers with Ischemia-Reperfusion Injury

Mitochondrial function in lungs of rats with different susceptibilities to hyperoxia-induced Acute Respiratory Distress Syndrome (ARDS)

Altered Hepatic Mitochondrial Bioenergetics and Oxidant Emission with Ischemia and Reperfusion

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