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Widespread and frequent horizontal transfers of transposable elements in plants

Genome research, 2014-05, Vol.24 (5), p.831-838

2014

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Detection of active transposable elements in Arabidopsis thaliana using Oxford Nanopore Sequencing technology

BMC genomics, 2017-07, Vol.18 (1), p.537-537, Article 537

2017

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Genome-wide analysis of horizontal transfer in non-model wild species from a natural ecosystem reveals new insights into genetic exchange in plants

PLoS genetics, 2023-10, Vol.19 (10), p.e1010964-e1010964

2023

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Horizontal Gene Transfers in Plants

Life (Basel, Switzerland), 2021-08, Vol.11 (8), p.857

2021

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The ecology of the genome and the dynamics of the biological dark matter

Journal of theoretical biology, 2021-06, Vol.518, p.110641-110641, Article 110641

2021

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DNA transposon activity is associated with increased mutation rates in genes of rice and other grasses

Nature communications, 2016-09, Vol.7 (1), p.12790-12790, Article 12790

2016

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Genome of the early spider-orchid Ophrys sphegodes provides insights into sexual deception and pollinator adaptation

Nature communications, 2024-07, Vol.15 (1), p.6308-12, Article 6308

2024

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Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features

Proceedings of the National Academy of Sciences - PNAS, 2006-08, Vol.103 (31), p.11647-11652

2006

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LTR retrotransposons in rice (Oryza sativa, L.): recent burst amplifications followed by rapid DNA loss

BMC genomics, 2007-07, Vol.8 (1), p.218-218, Article 218

2007

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The molecular bases of cereal domestication and the history of rice

Comptes rendus. Biologies, 2009-02, Vol.332 (2), p.267-272

Panaud, Olivier

2009

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Horizontal transfers of transposable elements in eukaryotes: The flying genes

Comptes rendus. Biologies, 2016-07, Vol.339 (7-8), p.296-299

Panaud, Olivier

2016

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Identification of high-copy number long terminal repeat retrotransposons and their expansion in Phalaenopsis orchids

BMC genomics, 2020-11, Vol.21 (1), p.807-807, Article 807

2020

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RiTE database: a resource database for genus-wide rice genomics and evolutionary biology

BMC genomics, 2015-07, Vol.16 (1), p.538-538, Article 538

2015

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A new approach for annotation of transposable elements using small RNA mapping

Nucleic acids research, 2015-07, Vol.43 (13), p.e84-e84

2015

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QTL Mapping Combined With Comparative Analyses Identified Candidate Genes for Reduced Shattering in Setaria italica

Frontiers in plant science, 2018-07, Vol.9, p.918-918

2018

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Abiotic stress and genome dynamics: specific genes and transposable elements response to iron excess in rice

Rice (New York, N.Y.), 2015, Vol.8 (1), p.13-13, Article 13

2015

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Plant root transcriptome profiling reveals a strain-dependent response during Azospirillum-rice cooperation

Frontiers in plant science, 2014-11, Vol.5, p.607-607

2014

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Drivers and dynamics of diversity in plant genomes

The New phytologist, 2014-04, Vol.202 (1), p.15-18

2014

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A genetic model for the female sterility barrier between Asian and African cultivated rice species

Genetics (Austin), 2010-08, Vol.185 (4), p.1425-1440

2010

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Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice

BMC plant biology, 2008-12, Vol.8 (1), p.123-123, Article 123

2008

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The impact of transposable elements on the structure, evolution and function of the rice genome

The New phytologist, 2020-04, Vol.226 (1), p.44-49

2020

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Diverse and mobile: eccDNA‐based identification of carrot low‐copy‐number LTR retrotransposons active in callus cultures

The Plant journal : for cell and molecular biology, 2022-06, Vol.110 (6), p.1811-1828

2022

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Oak genome reveals facets of long lifespan

Nature plants, 2018-07, Vol.4 (7), p.440-452

2018

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Amplification dynamics of miniature inverted‐repeat transposable elements and their impact on rice trait variability

The Plant journal : for cell and molecular biology, 2021-07, Vol.107 (1), p.118-135

2021

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The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication

Widespread and frequent horizontal transfers of transposable elements in plants

Detection of active transposable elements in Arabidopsis thaliana using Oxford Nanopore Sequencing technology

Genome-wide analysis of horizontal transfer in non-model wild species from a natural ecosystem reveals new insights into genetic exchange in plants

Horizontal Gene Transfers in Plants

The ecology of the genome and the dynamics of the biological dark matter

DNA transposon activity is associated with increased mutation rates in genes of rice and other grasses

Genome of the early spider-orchid Ophrys sphegodes provides insights into sexual deception and pollinator adaptation

Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features

LTR retrotransposons in rice (Oryza sativa, L.): recent burst amplifications followed by rapid DNA loss

The molecular bases of cereal domestication and the history of rice

Horizontal transfers of transposable elements in eukaryotes: The flying genes

Identification of high-copy number long terminal repeat retrotransposons and their expansion in Phalaenopsis orchids

RiTE database: a resource database for genus-wide rice genomics and evolutionary biology

A new approach for annotation of transposable elements using small RNA mapping

QTL Mapping Combined With Comparative Analyses Identified Candidate Genes for Reduced Shattering in Setaria italica

Abiotic stress and genome dynamics: specific genes and transposable elements response to iron excess in rice

Plant root transcriptome profiling reveals a strain-dependent response during Azospirillum-rice cooperation

Drivers and dynamics of diversity in plant genomes

A genetic model for the female sterility barrier between Asian and African cultivated rice species

Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice

The impact of transposable elements on the structure, evolution and function of the rice genome

Diverse and mobile: eccDNA‐based identification of carrot low‐copy‐number LTR retrotransposons active in callus cultures

Oak genome reveals facets of long lifespan

Amplification dynamics of miniature inverted‐repeat transposable elements and their impact on rice trait variability

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