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Guidelines for using Bsoft for high resolution reconstruction and validation of biomolecular structures from electron micrographs

Protein science, 2018-01, Vol.27 (1), p.159-171

Heymann, J. Bernard

2018

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Single particle reconstruction and validation using Bsoft for the map challenge

Journal of structural biology, 2018-10, Vol.204 (1), p.90-95

Heymann, J. Bernard

2018

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Structural Studies of Bacteriophage Φ6 and Its Transformations during Its Life Cycle

Viruses, 2023-12, Vol.15 (12), p.2404

Heymann, J Bernard

2023

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HIV-1 Maturation Inhibitor Bevirimat Stabilizes the Immature Gag Lattice

Journal of Virology, 2011-02, Vol.85 (4), p.1420-1428

2011

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The Ewald sphere/focus gradient does not limit the resolution of cryoEM reconstructions

Journal of structural biology. X, 2023-01, Vol.7, p.100083, Article 100083

Heymann, J. Bernard

2023

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Structural Changes in Influenza Virus at Low pH Characterized by Cryo-Electron Tomography

Journal of Virology, 2012-03, Vol.86 (6), p.2919-2929

2012

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The Primary Enveloped Virion of Herpes Simplex Virus 1: Its Role in Nuclear Egress

mBio, 2017-06, Vol.8 (3)

2017

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Cryo-Electron Tomography of the Herpesvirus Procapsid Reveals Interactions of the Portal with the Scaffold and a Shift on Maturation

mBio, 2021-03, Vol.12 (2)

2021

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Atomic structures of an entire contractile injection system in both the extended and contracted states

Nature microbiology, 2019-11, Vol.4 (11), p.1885-1894

2019

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The Structure of HIV-1 Rev Filaments Suggests a Bilateral Model for Rev-RRE Assembly

Structure (London), 2016-07, Vol.24 (7), p.1068-1080

2016

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The progressive spectral signal-to-noise ratio of cryo-electron micrograph movies as a tool to assess quality and radiation damage

Computer methods and programs in biomedicine, 2022-06, Vol.220, p.106799-106799, Article 106799

Heymann, J Bernard

2022

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The Mottled Capsid of the Salmonella Giant Phage SPN3US, a Likely Maturation Intermediate with a Novel Internal Shell

Viruses, 2020-08, Vol.12 (9), p.910

2020

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Three-dimensional Structure of the Toxin-delivery Particle Antifeeding Prophage of Serratia entomophila

The Journal of biological chemistry, 2013-08, Vol.288 (35), p.25276-25284

2013

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Validation of 3D EM Reconstructions: The Phantom in the Noise

AIMS biophysics, 2015-01, Vol.2 (1), p.21-35

Heymann, J Bernard

2015

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Towards an atlas of mammalian cell ultrastructure by cryo soft X-ray tomography

Journal of structural biology, 2012-02, Vol.177 (2), p.179-192

2012

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Computational resources for cryo-electron tomography in Bsoft

Journal of structural biology, 2008-03, Vol.161 (3), p.232-242

2008

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Map Challenge assessment: Fair comparison of single particle cryoEM reconstructions

Journal of structural biology, 2018-11, Vol.204 (2), p.360-367

Heymann, J. Bernard

2018

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Carbon replicas reveal double stranded structure of tight junctions in phase-contrast electron microscopy

Communications biology, 2019-03, Vol.2 (1), p.98-98, Article 98

2019

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CTF Challenge: Result summary

Journal of structural biology, 2015-06, Vol.190 (3), p.348-359

2015

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Advances in understanding the molecular structure of retinoschisin while questions remain of biological function

Progress in retinal and eye research, 2023-07, Vol.95, p.101147-101147, Article 101147

2023

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Single‐particle reconstruction statistics: a diagnostic tool in solving biomolecular structures by cryo‐EM

Acta crystallographica. Section F, Structural biology communications, 2019-01, Vol.75 (1), p.33-44

Heymann, J. Bernard

2019

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Three-dimensional cellular ultrastructure resolved by X-ray microscopy

Nature methods, 2010-12, Vol.7 (12), p.985-987

2010

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Dynamics of herpes simplex virus capsid maturation visualized by time-lapse cryo-electron microscopy

Nature structural & molecular biology, 2003-05, Vol.10 (5), p.334-341

2003

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α-Synuclein Amyloid Fibrils with Two Entwined, Asymmetrically Associated Protofibrils

The Journal of biological chemistry, 2016-01, Vol.291 (5), p.2310-2318

2016

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Cryo-EM of retinoschisin branched networks suggests an intercellular adhesive scaffold in the retina

The Journal of cell biology, 2019-03, Vol.218 (3), p.1027-1038

2019

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Guidelines for using Bsoft for high resolution reconstruction and validation of biomolecular structures from electron micrographs

Single particle reconstruction and validation using Bsoft for the map challenge

Structural Studies of Bacteriophage Φ6 and Its Transformations during Its Life Cycle

HIV-1 Maturation Inhibitor Bevirimat Stabilizes the Immature Gag Lattice

The Ewald sphere/focus gradient does not limit the resolution of cryoEM reconstructions

Structural Changes in Influenza Virus at Low pH Characterized by Cryo-Electron Tomography

The Primary Enveloped Virion of Herpes Simplex Virus 1: Its Role in Nuclear Egress

Cryo-Electron Tomography of the Herpesvirus Procapsid Reveals Interactions of the Portal with the Scaffold and a Shift on Maturation

Atomic structures of an entire contractile injection system in both the extended and contracted states

The Structure of HIV-1 Rev Filaments Suggests a Bilateral Model for Rev-RRE Assembly

The progressive spectral signal-to-noise ratio of cryo-electron micrograph movies as a tool to assess quality and radiation damage

The Mottled Capsid of the Salmonella Giant Phage SPN3US, a Likely Maturation Intermediate with a Novel Internal Shell

Three-dimensional Structure of the Toxin-delivery Particle Antifeeding Prophage of Serratia entomophila

Validation of 3D EM Reconstructions: The Phantom in the Noise

Towards an atlas of mammalian cell ultrastructure by cryo soft X-ray tomography

Computational resources for cryo-electron tomography in Bsoft

Map Challenge assessment: Fair comparison of single particle cryoEM reconstructions

Carbon replicas reveal double stranded structure of tight junctions in phase-contrast electron microscopy

CTF Challenge: Result summary

Advances in understanding the molecular structure of retinoschisin while questions remain of biological function

Single‐particle reconstruction statistics: a diagnostic tool in solving biomolecular structures by cryo‐EM

Three-dimensional cellular ultrastructure resolved by X-ray microscopy

Dynamics of herpes simplex virus capsid maturation visualized by time-lapse cryo-electron microscopy

α-Synuclein Amyloid Fibrils with Two Entwined, Asymmetrically Associated Protofibrils

Cryo-EM of retinoschisin branched networks suggests an intercellular adhesive scaffold in the retina

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