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Changes in intestinal barrier function and gut microbiota in high-fat diet-fed rats are dynamic and region dependent

American journal of physiology: Gastrointestinal and liver physiology, 2015-05, Vol.308 (10), p.G840-G851

2015

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SAMSA2: a standalone metatranscriptome analysis pipeline

BMC bioinformatics, 2018-05, Vol.19 (1), p.175-175, Article 175

2018

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RNA sequencing of the human milk fat layer transcriptome reveals distinct gene expression profiles at three stages of lactation

PloS one, 2013-07, Vol.8 (7), p.e67531-e67531

2013

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Creation of a milk oligosaccharide database, MilkOligoDB, reveals common structural motifs and extensive diversity across mammals

Scientific reports, 2023-06, Vol.13 (1), p.10345-10345, Article 10345

2023

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Comparative transcriptomics reveals key differences in the response to milk oligosaccharides of infant gut-associated bifidobacteria

Scientific reports, 2015-09, Vol.5 (1), p.13517-13517, Article 13517

2015

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Human milk oligosaccharides in premature infants: absorption, excretion, and influence on the intestinal microbiota

Pediatric research, 2015-12, Vol.78 (6), p.670-677

2015

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A novel gene cluster allows preferential utilization of fucosylated milk oligosaccharides in Bifidobacterium longum subsp. longum SC596

Scientific reports, 2016-10, Vol.6 (1), p.35045-35045, Article 35045

2016

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Pre- and post-sequencing recommendations for functional annotation of human fecal metagenomes

BMC bioinformatics, 2020-02, Vol.21 (1), p.74-74, Article 74

2020

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Epigenetic Modifications Unlock the Milk Protein Gene Loci during Mouse Mammary Gland Development and Differentiation

PloS one, 2013-01, Vol.8 (1), p.e53270-e53270

2013

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Association of Diet and Antimicrobial Resistance in Healthy U.S. Adults

mBio, 2022-05, Vol.13 (3), p.e0010122-e0010122

2022

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The collaborative effect of scientific meetings: A study of the International Milk Genomics Consortium

PloS one, 2018-08, Vol.13 (8), p.e0201637-e0201637

2018

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Surveying Nutrient Assessment with Photographs of Meals (SNAPMe): A Benchmark Dataset of Food Photos for Dietary Assessment

Nutrients, 2023-11, Vol.15 (23), p.4972

2023

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Genome-wide identification of peroxisome proliferator response elements using integrated computational genomics

Journal of lipid research, 2006-07, Vol.47 (7), p.1583-1587

2006

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No Associations between Dairy Intake and Markers of Gastrointestinal Inflammation in Healthy Adult Cohort

Nutrients, 2023-08, Vol.15 (16), p.3504

2023

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Saturated and Polyunsaturated Fatty Acids Reciprocally Modulate Dendritic Cell Functions Mediated through TLR4

The Journal of immunology (1950), 2005-05, Vol.174 (9), p.5390-5397

2005

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The Fecal Microbial Community of Breast-fed Infants from Armenia and Georgia

Scientific reports, 2017-02, Vol.7 (1), p.40932-40932, Article 40932

2017

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Association of Lactase Persistence Genotypes (rs4988235) and Ethnicity with Dairy Intake in a Healthy U.S. Population

Nutrients, 2019-08, Vol.11 (8), p.1860

2019

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The Development of the Davis Food Glycopedia-A Glycan Encyclopedia of Food

Nutrients, 2022-04, Vol.14 (8), p.1639

2022

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Association of the Lactase Persistence Haplotype Block With Disease Risk in Populations of European Descent

Frontiers in genetics, 2020-10, Vol.11, p.558762-558762

2020

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From Genes to Milk: Genomic Organization and Epigenetic Regulation of the Mammary Transcriptome

PloS one, 2013-09, Vol.8 (9), p.e75030-e75030

2013

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Associations among Milk Microbiota, Milk Fatty Acids, Milk Glycans, and Inflammation from Lactating Holstein Cows

Microbiology spectrum, 2023-06, Vol.11 (3), p.e0402022-e0402022

2023

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Diet, Microbiome, and Inflammation Predictors of Fecal and Plasma Short-Chain Fatty Acids in Humans

The Journal of nutrition, 2024-08

2024

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Lower Diet Quality Associated with Subclinical Gastrointestinal Inflammation in Healthy United States Adults

The Journal of nutrition, 2024-04, Vol.154 (4), p.1449-1460

2024

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SAMSA: a comprehensive metatranscriptome analysis pipeline

BMC bioinformatics, 2016-09, Vol.17 (1), p.399-399, Article 399

2016

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Unlocking the bovine genome

BMC genomics, 2009-04, Vol.10 (193), p.193-193

2009

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Changes in intestinal barrier function and gut microbiota in high-fat diet-fed rats are dynamic and region dependent

SAMSA2: a standalone metatranscriptome analysis pipeline

RNA sequencing of the human milk fat layer transcriptome reveals distinct gene expression profiles at three stages of lactation

Creation of a milk oligosaccharide database, MilkOligoDB, reveals common structural motifs and extensive diversity across mammals

Comparative transcriptomics reveals key differences in the response to milk oligosaccharides of infant gut-associated bifidobacteria

Human milk oligosaccharides in premature infants: absorption, excretion, and influence on the intestinal microbiota

A novel gene cluster allows preferential utilization of fucosylated milk oligosaccharides in Bifidobacterium longum subsp. longum SC596

Pre- and post-sequencing recommendations for functional annotation of human fecal metagenomes

Epigenetic Modifications Unlock the Milk Protein Gene Loci during Mouse Mammary Gland Development and Differentiation

Association of Diet and Antimicrobial Resistance in Healthy U.S. Adults

The collaborative effect of scientific meetings: A study of the International Milk Genomics Consortium

Surveying Nutrient Assessment with Photographs of Meals (SNAPMe): A Benchmark Dataset of Food Photos for Dietary Assessment

Genome-wide identification of peroxisome proliferator response elements using integrated computational genomics

No Associations between Dairy Intake and Markers of Gastrointestinal Inflammation in Healthy Adult Cohort

Saturated and Polyunsaturated Fatty Acids Reciprocally Modulate Dendritic Cell Functions Mediated through TLR4

The Fecal Microbial Community of Breast-fed Infants from Armenia and Georgia

Association of Lactase Persistence Genotypes (rs4988235) and Ethnicity with Dairy Intake in a Healthy U.S. Population

The Development of the Davis Food Glycopedia-A Glycan Encyclopedia of Food

Association of the Lactase Persistence Haplotype Block With Disease Risk in Populations of European Descent

From Genes to Milk: Genomic Organization and Epigenetic Regulation of the Mammary Transcriptome

Associations among Milk Microbiota, Milk Fatty Acids, Milk Glycans, and Inflammation from Lactating Holstein Cows

Diet, Microbiome, and Inflammation Predictors of Fecal and Plasma Short-Chain Fatty Acids in Humans

Lower Diet Quality Associated with Subclinical Gastrointestinal Inflammation in Healthy United States Adults

SAMSA: a comprehensive metatranscriptome analysis pipeline

Unlocking the bovine genome

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