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Evidence for the role of transcription factors in the co-transcriptional regulation of intron retention

Genome Biology, 2023-03, Vol.24 (1), p.53-53, Article 53

2023

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RODAN: a fully convolutional architecture for basecalling nanopore RNA sequencing data

BMC bioinformatics, 2022-04, Vol.23 (1), p.142-142, Article 142

2022

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A survey of the sorghum transcriptome using single-molecule long reads

Nature communications, 2016-06, Vol.7 (1), p.11706-11706, Article 11706

2016

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Alternative Splicing Variation: Accessing and Exploiting in Crop Improvement Programs

International journal of molecular sciences, 2023-10, Vol.24 (20), p.15205

2023

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The origins of flow softening during high-temperature deformation of a Ti–6Al–4V alloy with a lamellar microstructure

Journal of alloys and compounds, 2014-01, Vol.582, p.126-129

2014

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Multiplex CRISPR Mutagenesis of the Serine/Arginine-Rich (SR) Gene Family in Rice

Genes, 2019-08, Vol.10 (8), p.596

2019

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Transcriptome Analysis of Drought-Resistant and Drought-Sensitive Sorghum ( Sorghum bicolor ) Genotypes in Response to PEG-Induced Drought Stress

International journal of molecular sciences, 2020-01, Vol.21 (3), p.772

2020

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The Landscape of RNA-Protein Interactions in Plants: Approaches and Current Status

International journal of molecular sciences, 2021-03, Vol.22 (6), p.2845

2021

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Alternative Splicing and Protein Diversity: Plants Versus Animals

Frontiers in plant science, 2019-06, Vol.10, p.708-708

2019

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Quantitative profiling of N6-methyladenosine at single-base resolution in stem-differentiating xylem of Populus trichocarpa using Nanopore direct RNA sequencing

Genome Biology, 2021-01, Vol.22 (1), p.1, Article 22

2021

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Development of an in vitro pre-mRNA splicing assay using plant nuclear extract

Plant methods, 2018-01, Vol.14 (1), p.1-1, Article 1

2018

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Stress-Induced Changes in Alternative Splicing Landscape in Rice: Functional Significance of Splice Isoforms in Stress Tolerance

Biology (Basel, Switzerland), 2021-04, Vol.10 (4), p.309

2021

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The Rice Serine/Arginine Splicing Factor RS33 Regulates Pre-mRNA Splicing during Abiotic Stress Responses

Cells (Basel, Switzerland), 2022-05, Vol.11 (11), p.1796

2022

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Description of Hymenobacter arizonensis sp. nov. from the southwestern arid lands of the United States of America

Antonie van Leeuwenhoek, 2013-02, Vol.103 (2), p.321-330

2013

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Complexity of the Alternative Splicing Landscape in Plants

The Plant cell, 2013-10, Vol.25 (10), p.3657-3683

2013

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Analysis of Transcriptome and Epitranscriptome in Plants Using PacBio Iso-Seq and Nanopore-Based Direct RNA Sequencing

Frontiers in genetics, 2019-03, Vol.10, p.253-253

2019

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Comparative analysis of serine/arginine-rich proteins across 27 eukaryotes: insights into sub-family classification and extent of alternative splicing

PloS one, 2011-09, Vol.6 (9), p.e24542-e24542

2011

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Perspective on Alternative Splicing and Proteome Complexity in Plants

Trends in plant science, 2019-06, Vol.24 (6), p.496-506

2019

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Austro-Asiatic tribes of Northeast India provide hitherto missing genetic link between South and Southeast Asia

PloS one, 2007-11, Vol.2 (11), p.e1141-e1141

2007

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Regulation of plant developmental processes by a novel splicing factor

PloS one, 2007-05, Vol.2 (5), p.e471-e471

2007

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Interactions of SR45, an SR‐like protein, with spliceosomal proteins and an intronic sequence: insights into regulated splicing

The Plant journal : for cell and molecular biology, 2012-09, Vol.71 (6), p.936-947

2012

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DNA-Binding Activity of CAMTA3 Is Essential for Its Function: Identification of Critical Amino Acids for Its Transcriptional Activity

Cells (Basel, Switzerland), 2023-08, Vol.12 (15), p.1986

2023

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Abiotic Stresses Modulate Landscape of Poplar Transcriptome via Alternative Splicing, Differential Intron Retention, and Isoform Ratio Switching

Frontiers in plant science, 2018-02, Vol.9, p.5-5

2018

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Polarized cell growth, organelle motility, and cytoskeletal organization in conifer pollen tube tips are regulated by KCBP, the calmodulin-binding kinesin

Planta, 2013-09, Vol.238 (3), p.587-597

2013

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Bacillus aerius sp. nov., Bacillus aerophilus sp. nov., Bacillus stratosphericus sp. nov. and Bacillus altitudinis sp. nov., isolated from cryogenic tubes used for collecting air samples from high altitudes

International journal of systematic and evolutionary microbiology, 2006-07, Vol.56 (7), p.1465-1473

2006

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Evidence for the role of transcription factors in the co-transcriptional regulation of intron retention

RODAN: a fully convolutional architecture for basecalling nanopore RNA sequencing data

A survey of the sorghum transcriptome using single-molecule long reads

Alternative Splicing Variation: Accessing and Exploiting in Crop Improvement Programs

The origins of flow softening during high-temperature deformation of a Ti–6Al–4V alloy with a lamellar microstructure

Multiplex CRISPR Mutagenesis of the Serine/Arginine-Rich (SR) Gene Family in Rice

Transcriptome Analysis of Drought-Resistant and Drought-Sensitive Sorghum ( Sorghum bicolor ) Genotypes in Response to PEG-Induced Drought Stress

The Landscape of RNA-Protein Interactions in Plants: Approaches and Current Status

Alternative Splicing and Protein Diversity: Plants Versus Animals

Quantitative profiling of N6-methyladenosine at single-base resolution in stem-differentiating xylem of Populus trichocarpa using Nanopore direct RNA sequencing

Development of an in vitro pre-mRNA splicing assay using plant nuclear extract

Stress-Induced Changes in Alternative Splicing Landscape in Rice: Functional Significance of Splice Isoforms in Stress Tolerance

The Rice Serine/Arginine Splicing Factor RS33 Regulates Pre-mRNA Splicing during Abiotic Stress Responses

Description of Hymenobacter arizonensis sp. nov. from the southwestern arid lands of the United States of America

Complexity of the Alternative Splicing Landscape in Plants

Analysis of Transcriptome and Epitranscriptome in Plants Using PacBio Iso-Seq and Nanopore-Based Direct RNA Sequencing

Comparative analysis of serine/arginine-rich proteins across 27 eukaryotes: insights into sub-family classification and extent of alternative splicing

Perspective on Alternative Splicing and Proteome Complexity in Plants

Austro-Asiatic tribes of Northeast India provide hitherto missing genetic link between South and Southeast Asia

Regulation of plant developmental processes by a novel splicing factor

Interactions of SR45, an SR‐like protein, with spliceosomal proteins and an intronic sequence: insights into regulated splicing

DNA-Binding Activity of CAMTA3 Is Essential for Its Function: Identification of Critical Amino Acids for Its Transcriptional Activity

Abiotic Stresses Modulate Landscape of Poplar Transcriptome via Alternative Splicing, Differential Intron Retention, and Isoform Ratio Switching

Polarized cell growth, organelle motility, and cytoskeletal organization in conifer pollen tube tips are regulated by KCBP, the calmodulin-binding kinesin

Bacillus aerius sp. nov., Bacillus aerophilus sp. nov., Bacillus stratosphericus sp. nov. and Bacillus altitudinis sp. nov., isolated from cryogenic tubes used for collecting air samples from high altitudes

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