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Stability and flexibility of epigenetic gene regulation in mammalian development

Nature, 2007-05, Vol.447 (7143), p.425-432

Reik, Wolf

2007

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Active turnover of DNA methylation during cell fate decisions

Nature reviews. Genetics, 2021-01, Vol.22 (1), p.59-66

2021

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Single-cell epigenomics: Recording the past and predicting the future

Science (American Association for the Advancement of Science), 2017-10, Vol.358 (6359), p.69-75

2017

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Dynamics of the epigenetic landscape during the maternal-to-zygotic transition

Nature reviews. Molecular cell biology, 2018-07, Vol.19 (7), p.436-450

2018

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DeepCpG: accurate prediction of single-cell DNA methylation states using deep learning

Genome Biology, 2017-04, Vol.18 (1), p.67-67, Article 67

2017

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Epigenetic resetting of human pluripotency

Development (Cambridge), 2017-08, Vol.144 (15), p.2748-2763

2017

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Uncovering the role of 5-hydroxymethylcytosine in the epigenome

Nature reviews. Genetics, 2012-01, Vol.13 (1), p.7-13

2012

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DNA methylation homeostasis in human and mouse development

Current opinion in genetics & development, 2017-04, Vol.43, p.101-109

2017

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Tracking the embryonic stem cell transition from ground state pluripotency

Development (Cambridge), 2017-04, Vol.144 (7), p.1221-1234

2017

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Epigenetic dynamics of stem cells and cell lineage commitment: digging Waddington's canal

Nature reviews. Molecular cell biology, 2009-08, Vol.10 (8), p.526-537

2009

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Comparison of whole-genome bisulfite sequencing library preparation strategies identifies sources of biases affecting DNA methylation data

Genome Biology, 2018-03, Vol.19 (1), p.33-33, Article 33

2018

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Reprogramming the Methylome: Erasing Memory and Creating Diversity

Cell stem cell, 2014-06, Vol.14 (6), p.710-719

2014

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Evolution and Functions of Long Noncoding RNAs

Cell, 2009-02, Vol.136 (4), p.629-641

2009

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Single-cell epigenomics: powerful new methods for understanding gene regulation and cell identity

Genome Biology, 2016-04, Vol.17 (1), p.72-72, Article 72

2016

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Dppa2 and Dppa4 directly regulate the Dux-driven zygotic transcriptional program

Genes & development, 2019-02, Vol.33 (3-4), p.194-208

2019

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Quantitative Sequencing of 5-Methylcytosine and 5-Hydroxymethylcytosine at Single-Base Resolution

Science (American Association for the Advancement of Science), 2012-05, Vol.336 (6083), p.934-937

2012

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Resetting transcription factor control circuitry toward ground-state pluripotency in human

Cell, 2014-09, Vol.158 (6), p.1254-1269

2014

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Low rates of mutation in clinical grade human pluripotent stem cells under different culture conditions

Nature communications, 2020-03, Vol.11 (1), p.1528-1528, Article 1528

2020

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DNA methylation aging clocks: challenges and recommendations

Genome Biology, 2019-11, Vol.20 (1), p.249-24, Article 249

2019

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Ageing affects DNA methylation drift and transcriptional cell-to-cell variability in mouse muscle stem cells

Nature communications, 2019-09, Vol.10 (1), p.4361-11, Article 4361

2019

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Tet3 regulates cellular identity and DNA methylation in neural progenitor cells

Cellular and molecular life sciences : CMLS, 2020-07, Vol.77 (14), p.2871-2883

2020

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Reprogramming DNA methylation in the mammalian life cycle: building and breaking epigenetic barriers

Philosophical transactions of the Royal Society of London. Series B. Biological sciences, 2013-01, Vol.368 (1609), p.20110330

2013

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Single cell transcriptome analysis of human, marmoset and mouse embryos reveals common and divergent features of preimplantation development

Development (Cambridge), 2018-11, Vol.145 (21)

2018

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Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation

Nature (London), 2011-05, Vol.473 (7347), p.398-402

2011

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Multi-omics profiling of mouse gastrulation at single-cell resolution

Nature (London), 2019-12, Vol.576 (7787), p.487-491

2019

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Stability and flexibility of epigenetic gene regulation in mammalian development

Active turnover of DNA methylation during cell fate decisions

Single-cell epigenomics: Recording the past and predicting the future

Dynamics of the epigenetic landscape during the maternal-to-zygotic transition

DeepCpG: accurate prediction of single-cell DNA methylation states using deep learning

Epigenetic resetting of human pluripotency

Uncovering the role of 5-hydroxymethylcytosine in the epigenome

DNA methylation homeostasis in human and mouse development

Tracking the embryonic stem cell transition from ground state pluripotency

Epigenetic dynamics of stem cells and cell lineage commitment: digging Waddington's canal

Comparison of whole-genome bisulfite sequencing library preparation strategies identifies sources of biases affecting DNA methylation data

Reprogramming the Methylome: Erasing Memory and Creating Diversity

Evolution and Functions of Long Noncoding RNAs

Single-cell epigenomics: powerful new methods for understanding gene regulation and cell identity

Dppa2 and Dppa4 directly regulate the Dux-driven zygotic transcriptional program

Quantitative Sequencing of 5-Methylcytosine and 5-Hydroxymethylcytosine at Single-Base Resolution

Resetting transcription factor control circuitry toward ground-state pluripotency in human

Low rates of mutation in clinical grade human pluripotent stem cells under different culture conditions

DNA methylation aging clocks: challenges and recommendations

Ageing affects DNA methylation drift and transcriptional cell-to-cell variability in mouse muscle stem cells

Tet3 regulates cellular identity and DNA methylation in neural progenitor cells

Reprogramming DNA methylation in the mammalian life cycle: building and breaking epigenetic barriers

Single cell transcriptome analysis of human, marmoset and mouse embryos reveals common and divergent features of preimplantation development

Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation

Multi-omics profiling of mouse gastrulation at single-cell resolution

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