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Outbreak analytics: a developing data science for informing the response to emerging pathogens

Philosophical transactions of the Royal Society of London. Series B. Biological sciences, 2019-07, Vol.374 (1776), p.20180276

2019

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Assessing the performance of real-time epidemic forecasts: A case study of Ebola in the Western Area region of Sierra Leone, 2014-15

PLoS computational biology, 2019-02, Vol.15 (2), p.e1006785-e1006785

2019

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Transmission Dynamics of Zika Virus in Island Populations: A Modelling Analysis of the 2013-14 French Polynesia Outbreak

PLoS neglected tropical diseases, 2016-05, Vol.10 (5), p.e0004726-e0004726

2016

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Case fatality rate for Ebola virus disease in west Africa

The Lancet (British edition), 2014-10, Vol.384 (9950), p.1260-1260

2014

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A Systematic Review of Social Contact Surveys to Inform Transmission Models of Close-contact Infections

Epidemiology (Cambridge, Mass.), 2019-09, Vol.30 (5), p.723-736

2019

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Estimation of Rift Valley fever virus spillover to humans during the Mayotte 2018–2019 epidemic

Proceedings of the National Academy of Sciences - PNAS, 2020-09, Vol.117 (39), p.24567-24574

2020

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Measured dynamic social contact patterns explain the spread of H1N1v influenza

PLoS computational biology, 2012-03, Vol.8 (3), p.e1002425-e1002425

2012

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Identifying transmission cycles at the human-animal interface: the role of animal reservoirs in maintaining gambiense human african trypanosomiasis

PLoS computational biology, 2013-01, Vol.9 (1), p.e1002855-e1002855

2013

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Dynamic histone H3 methylation during gene induction: HYPB/Setd2 mediates all H3K36 trimethylation

The EMBO journal, 2008-01, Vol.27 (2), p.406-420

2008

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Longitudinal social contact data analysis: insights from 2 years of data collection in Belgium during the COVID-19 pandemic

BMC public health, 2023-07, Vol.23 (1), p.1298-1298, Article 1298

2023

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The impact of Covid-19, associated behaviours and policies on the UK economy: A computable general equilibrium model

SSM - population health, 2020-12, Vol.12, p.100651-100651, Article 100651

2020

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Comparative Analysis of Dengue and Zika Outbreaks Reveals Differences by Setting and Virus

PLoS neglected tropical diseases, 2016-12, Vol.10 (12), p.e0005173-e0005173

2016

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Science in the time of COVID-19: Reflections on the UK Events Research Programme

Nature communications, 2022-08, Vol.13 (1), p.4700-4700, Article 4700

2022

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Inference is bliss: Simulation for power estimation for an observational study of a cholera outbreak intervention

PLoS neglected tropical diseases, 2022-02, Vol.16 (2), p.e0010163-e0010163

2022

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Modelling the persistence and control of Rift Valley fever virus in a spatially heterogeneous landscape

Nature communications, 2021-09, Vol.12 (1), p.5593-13, Article 5593

2021

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The influence of risk perceptions on close contact frequency during the SARS-CoV-2 pandemic

Scientific reports, 2022-03, Vol.12 (1), p.5192-5192, Article 5192

2022

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Vaccine efficacy trials for Crimean-Congo haemorrhagic fever: Insights from modelling different epidemiological settings

Vaccine, 2022-09, Vol.40 (40), p.5806-5813

2022

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The impact of pandemic influenza H1N1 on health-related quality of life: a prospective population-based study

PloS one, 2011-03, Vol.6 (3), p.e17030-e17030

2011

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The impact of control strategies and behavioural changes on the elimination of Ebola from Lofa County, Liberia

Philosophical transactions of the Royal Society of London. Series B. Biological sciences, 2017-05, Vol.372 (1721), p.20160302

2017

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Real-time forecasting of infectious disease dynamics with a stochastic semi-mechanistic model

Epidemics, 2018-03, Vol.22, p.56-61

2018

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SOCRATES-CoMix: a platform for timely and open-source contact mixing data during and in between COVID-19 surges and interventions in over 20 European countries

BMC medicine, 2021-09, Vol.19 (1), p.254-254, Article 254

2021

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Early detection of cholera epidemics to support control in fragile states: estimation of delays and potential epidemic sizes

BMC medicine, 2020-12, Vol.18 (1), p.397-397, Article 397

2020

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Age-dependent prevalence of nasopharyngeal carriage of streptococcus pneumoniae before conjugate vaccine introduction: a prediction model based on a meta-analysis

PloS one, 2014-01, Vol.9 (1), p.e86136-e86136

2014

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Measuring the unknown: An estimator and simulation study for assessing case reporting during epidemics

PLoS computational biology, 2022-05, Vol.18 (5), p.e1008800-e1008800

2022

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A mathematical model of Marburg virus disease outbreaks and the potential role of vaccination in control

BMC medicine, 2023-11, Vol.21 (1), p.439-16, Article 439

2023

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Outbreak analytics: a developing data science for informing the response to emerging pathogens

Assessing the performance of real-time epidemic forecasts: A case study of Ebola in the Western Area region of Sierra Leone, 2014-15

Transmission Dynamics of Zika Virus in Island Populations: A Modelling Analysis of the 2013-14 French Polynesia Outbreak

Case fatality rate for Ebola virus disease in west Africa

A Systematic Review of Social Contact Surveys to Inform Transmission Models of Close-contact Infections

Estimation of Rift Valley fever virus spillover to humans during the Mayotte 2018–2019 epidemic

Measured dynamic social contact patterns explain the spread of H1N1v influenza

Identifying transmission cycles at the human-animal interface: the role of animal reservoirs in maintaining gambiense human african trypanosomiasis

Dynamic histone H3 methylation during gene induction: HYPB/Setd2 mediates all H3K36 trimethylation

Longitudinal social contact data analysis: insights from 2 years of data collection in Belgium during the COVID-19 pandemic

The impact of Covid-19, associated behaviours and policies on the UK economy: A computable general equilibrium model

Comparative Analysis of Dengue and Zika Outbreaks Reveals Differences by Setting and Virus

Science in the time of COVID-19: Reflections on the UK Events Research Programme

Inference is bliss: Simulation for power estimation for an observational study of a cholera outbreak intervention

Modelling the persistence and control of Rift Valley fever virus in a spatially heterogeneous landscape

The influence of risk perceptions on close contact frequency during the SARS-CoV-2 pandemic

Vaccine efficacy trials for Crimean-Congo haemorrhagic fever: Insights from modelling different epidemiological settings

The impact of pandemic influenza H1N1 on health-related quality of life: a prospective population-based study

The impact of control strategies and behavioural changes on the elimination of Ebola from Lofa County, Liberia

Real-time forecasting of infectious disease dynamics with a stochastic semi-mechanistic model

SOCRATES-CoMix: a platform for timely and open-source contact mixing data during and in between COVID-19 surges and interventions in over 20 European countries

Early detection of cholera epidemics to support control in fragile states: estimation of delays and potential epidemic sizes

Age-dependent prevalence of nasopharyngeal carriage of streptococcus pneumoniae before conjugate vaccine introduction: a prediction model based on a meta-analysis

Measuring the unknown: An estimator and simulation study for assessing case reporting during epidemics

A mathematical model of Marburg virus disease outbreaks and the potential role of vaccination in control

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