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Stability-activity tradeoffs constrain the adaptive evolution of RubisCO

Proceedings of the National Academy of Sciences - PNAS, 2014-02, Vol.111 (6), p.2223-2228

2014

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Predicting human and viral protein variants affecting COVID-19 susceptibility and repurposing therapeutics

Scientific reports, 2024-06, Vol.14 (1), p.14208-19, Article 14208

2024

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CATH FunFHMMer web server: protein functional annotations using functional family assignments

Nucleic acids research, 2015-07, Vol.43 (W1), p.W148-W153

2015

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Genome-wide RNA-Sequencing analysis identifies a distinct fibrosis gene signature in the conjunctiva after glaucoma surgery

Scientific reports, 2017-07, Vol.7 (1), p.5644-13, Article 5644

2017

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Protein families: relating protein sequence, structure, and function

1, 2013

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implications of alternative splicing in the ENCODE protein complement

Proceedings of the National Academy of Sciences - PNAS, 2007-03, Vol.104 (13), p.5495-5500

2007

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Recognition of sites of functional specialisation in all known eukaryotic protein kinase families

PLoS computational biology, 2018-02, Vol.14 (2), p.e1005975-e1005975

2018

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Target selection for structural genomics: an overview

Methods in molecular biology (Clifton, N.J.), 2008, Vol.426, p.3

2008

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CODA: accurate detection of functional associations between proteins in eukaryotic genomes using domain fusion

PloS one, 2010-06, Vol.5 (6), p.e10908-e10908

2010

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A CATH domain functional family based approach to identify putative cancer driver genes and driver mutations

Scientific reports, 2019-01, Vol.9 (1), p.263-263, Article 263

2019

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Metagenomic ene-reductases for the bioreduction of sterically challenging enones

RSC advances, 2019-11, Vol.9 (63), p.3668-36614

2019

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Dynamic changes in the brain protein interaction network correlates with progression of Aβ42 pathology in Drosophila

Scientific reports, 2020-10, Vol.10 (1), p.18517, Article 18517

2020

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Protein superfamilles and domain superfolds

Nature (London), 1994-12, Vol.372 (6507), p.631-634

1994

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Protein folds, functions and evolution

Journal of molecular biology, 1999-10, Vol.293 (2), p.333-342

1999

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The classification of protein domains

Methods in molecular biology (Clifton, N.J.), 2008, Vol.453, p.123

2008

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Sequences and topology: Genes and structures in context

Current opinion in structural biology, 2004-06, Vol.14 (3), p.261-263

2004

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Exploring structural diversity across the protein universe with The Encyclopedia of Domains

Science (American Association for the Advancement of Science), 2024-11, Vol.386 (6721), p.eadq4946

2024

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Alpha plus beta folds revisited: some favoured motifs

Structure (London), 1993-10, Vol.1 (2), p.105-120

1993

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Editorial overview: Genomic insights into evolution

Current opinion in structural biology, 2002-06, Vol.12 (3), p.345-347

2002

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Fast structure alignment for protein databank searching

Proteins, structure, function, and bioinformatics, 1992-10, Vol.14 (2), p.139-167

1992

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Evolution of function in protein superfamilies, from a structural perspective 1 1Edited by A. R. Fersht

Journal of molecular biology, 2001-04, Vol.307 (4), p.1113-1143

2001

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Protein families: relating protein sequence, structure, and function

2014

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Genome Analysis: Assigning Protein Coding Regions to 3D Structures

Genome Informatics, 1998, Vol.9, pp.357-358

1998

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Supplemental Images

Protein Families, 2014, p.c1-c31

2014

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Detailed Analysis of Function Divergence in a Large and Diverse Domain Superfamily: Towards a Refined Protocol of Function Classification

Structure (London), 2010-11, Vol.18 (11), p.1522-1535

2010

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Stability-activity tradeoffs constrain the adaptive evolution of RubisCO

Predicting human and viral protein variants affecting COVID-19 susceptibility and repurposing therapeutics

CATH FunFHMMer web server: protein functional annotations using functional family assignments

Genome-wide RNA-Sequencing analysis identifies a distinct fibrosis gene signature in the conjunctiva after glaucoma surgery

Protein families: relating protein sequence, structure, and function

implications of alternative splicing in the ENCODE protein complement

Recognition of sites of functional specialisation in all known eukaryotic protein kinase families

Target selection for structural genomics: an overview

CODA: accurate detection of functional associations between proteins in eukaryotic genomes using domain fusion

A CATH domain functional family based approach to identify putative cancer driver genes and driver mutations

Metagenomic ene-reductases for the bioreduction of sterically challenging enones

Dynamic changes in the brain protein interaction network correlates with progression of Aβ42 pathology in Drosophila

Protein superfamilles and domain superfolds

Protein folds, functions and evolution

The classification of protein domains

Sequences and topology: Genes and structures in context

Exploring structural diversity across the protein universe with The Encyclopedia of Domains

Alpha plus beta folds revisited: some favoured motifs

Editorial overview: Genomic insights into evolution

Fast structure alignment for protein databank searching

Evolution of function in protein superfamilies, from a structural perspective 1 1Edited by A. R. Fersht

Protein families: relating protein sequence, structure, and function

Genome Analysis: Assigning Protein Coding Regions to 3D Structures

Supplemental Images

Detailed Analysis of Function Divergence in a Large and Diverse Domain Superfamily: Towards a Refined Protocol of Function Classification

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