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Avoiding inferior clusterings with misspecified Gaussian mixture models

Scientific reports, 2023-11, Vol.13 (1), p.19164-19164, Article 19164

2023

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scMoMaT jointly performs single cell mosaic integration and multi-modal bio-marker detection

Nature communications, 2023-01, Vol.14 (1), p.384-384, Article 384

2023

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Three-Dimensional Modelling of Past and Present Shahjahanabad through Multi-Temporal Remotely Sensed Data

Remote sensing (Basel, Switzerland), 2023-06, Vol.15 (11), p.2924

2023

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A dual boundary classifier for predicting acute hypotensive episodes in critical care

PloS one, 2018-02, Vol.13 (2), p.e0193259-e0193259

2018

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Evaluating Explanations From AI Algorithms for Clinical Decision-Making: A Social Science-Based Approach

IEEE journal of biomedical and health informatics, 2024-07, Vol.28 (7), p.4269-4280

2024

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Patient Representation Learning From Heterogeneous Data Sources and Knowledge Graphs Using Deep Collective Matrix Factorization: Evaluation Study

JMIR medical informatics, 2022-01, Vol.10 (1), p.e28842

2022

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ExpertNet: A Deep Learning Approach to Combined Risk Modeling and Subtyping in Intensive Care Units

IEEE journal of biomedical and health informatics, 2023-10, Vol.27 (10), p.1-11

2023

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Adverse Drug Event Prediction Using Noisy Literature-Derived Knowledge Graphs: Algorithm Development and Validation

JMIR medical informatics, 2021-10, Vol.9 (10), p.e32730-e32730

2021

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Predicting synthetic lethal interactions using heterogeneous data sources

Bioinformatics, 2020-04, Vol.36 (7), p.2209-2216

2020

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Gaussian mixture copulas for high-dimensional clustering and dependency-based subtyping

Bioinformatics, 2020-01, Vol.36 (2), p.621-628

2020

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MetaBCC-LR: metagenomics binning by coverage and composition for long reads

Bioinformatics (Oxford, England), 2020-07, Vol.36 (Supplement_1), p.i3-i11

2020

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Deep collective matrix factorization for augmented multi-view learning

Machine learning, 2019-09, Vol.108 (8-9), p.1395-1420

2019

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Neural Collective Matrix Factorization for integrated analysis of heterogeneous biomedical data

Bioinformatics (Oxford, England), 2022-09, Vol.38 (19), p.4554-4561

2022

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A method of alignment masking for refining the phylogenetic signal of multiple sequence alignments

Molecular biology and evolution, 2013-03, Vol.30 (3), p.689-712

Rajan, Vaibhav

2013

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Improved Inference of Gaussian Mixture Copula Model for Clustering and Reproducibility Analysis using Automatic Differentiation

Econometrics and statistics, 2022-04, Vol.22, p.67-97

2022

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Maximum likelihood reconstruction of ancestral networks by integer linear programming

Bioinformatics, 2021-05, Vol.37 (8), p.1083-1092

2021

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Vine copulas for mixed data : multi-view clustering for mixed data beyond meta-Gaussian dependencies

Machine learning, 2017-10, Vol.106 (9-10), p.1331-1357

2017

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An Algorithm to Mine Therapeutic Motifs for Cancer From Networks of Genetic Interactions

IEEE journal of biomedical and health informatics, 2022-06, Vol.26 (6), p.2830-2838

2022

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Bootstrapping phylogenies inferred from rearrangement data

Algorithms for molecular biology, 2012-08, Vol.7 (1), p.21-21, Article 21

2012

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MetaBCC-LR: meta genomics b inning by c overage and c omposition for l ong r eads

Bioinformatics (Oxford, England), 2020-07, Vol.36 (Supplement_1), p.i3-i11

2020

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Estimating true evolutionary distances under rearrangements, duplications, and losses

BMC bioinformatics, 2010-01, Vol.11 Suppl 1 (S1), p.S54-S54, Article S54

2010

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Multi-disease Predictive Analytics: A Clinical Knowledge-aware Approach

ACM transactions on management information systems, 2021-09, Vol.12 (3), p.1-34

2021

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Abstract 3648: The spatial organization of cells expressing MYC and BCL2 affects immune microenvironment composition and prognosis in DLBCL

Cancer research (Chicago, Ill.), 2024-03, Vol.84 (6_Supplement), p.3648-3648

2024

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Analysis of gene copy number changes in tumor phylogenetics

Algorithms for molecular biology, 2016-09, Vol.11 (1), p.26-26, Article 26

2016

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TIBA: a tool for phylogeny inference from rearrangement data with bootstrap analysis

Bioinformatics, 2012-12, Vol.28 (24), p.3324-3325

2012

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Avoiding inferior clusterings with misspecified Gaussian mixture models

scMoMaT jointly performs single cell mosaic integration and multi-modal bio-marker detection

Three-Dimensional Modelling of Past and Present Shahjahanabad through Multi-Temporal Remotely Sensed Data

A dual boundary classifier for predicting acute hypotensive episodes in critical care

Evaluating Explanations From AI Algorithms for Clinical Decision-Making: A Social Science-Based Approach

Patient Representation Learning From Heterogeneous Data Sources and Knowledge Graphs Using Deep Collective Matrix Factorization: Evaluation Study

ExpertNet: A Deep Learning Approach to Combined Risk Modeling and Subtyping in Intensive Care Units

Adverse Drug Event Prediction Using Noisy Literature-Derived Knowledge Graphs: Algorithm Development and Validation

Predicting synthetic lethal interactions using heterogeneous data sources

Gaussian mixture copulas for high-dimensional clustering and dependency-based subtyping

MetaBCC-LR: metagenomics binning by coverage and composition for long reads

Deep collective matrix factorization for augmented multi-view learning

Neural Collective Matrix Factorization for integrated analysis of heterogeneous biomedical data

A method of alignment masking for refining the phylogenetic signal of multiple sequence alignments

Improved Inference of Gaussian Mixture Copula Model for Clustering and Reproducibility Analysis using Automatic Differentiation

Maximum likelihood reconstruction of ancestral networks by integer linear programming

Vine copulas for mixed data : multi-view clustering for mixed data beyond meta-Gaussian dependencies

An Algorithm to Mine Therapeutic Motifs for Cancer From Networks of Genetic Interactions

Bootstrapping phylogenies inferred from rearrangement data

MetaBCC-LR: meta genomics b inning by c overage and c omposition for l ong r eads

Estimating true evolutionary distances under rearrangements, duplications, and losses

Multi-disease Predictive Analytics: A Clinical Knowledge-aware Approach

Abstract 3648: The spatial organization of cells expressing MYC and BCL2 affects immune microenvironment composition and prognosis in DLBCL

Analysis of gene copy number changes in tumor phylogenetics

TIBA: a tool for phylogeny inference from rearrangement data with bootstrap analysis

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