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Metalign: efficient alignment-based metagenomic profiling via containment min hash

Genome Biology, 2020-09, Vol.21 (1), p.1-242, Article 242

2020

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Improving the usability and archival stability of bioinformatics software

Genome Biology, 2019-02, Vol.20 (1), p.47-47, Article 47

2019

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Early detection of emerging viral variants through analysis of community structure of coordinated substitution networks

Nature communications, 2024-04, Vol.15 (1), p.2838-2838, Article 2838

2024

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A Comprehensive Map of Genetic Variation in the World's Largest Ethnic Group-Han Chinese

Molecular biology and evolution, 2018-11, Vol.35 (11), p.2736-2750

2018

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Addressing the Digital Divide in Contemporary Biology: Lessons from Teaching UNIX

Trends in biotechnology (Regular ed.), 2017-10, Vol.35 (10), p.901-903

2017

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Bioinformatics Research and Applications: 18th International Symposium, ISBRA 2022, Haifa, Israel, November 14-17, 2022, Proceedings

1, 2023

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Virtual meetings promise to eliminate geographical and administrative barriers and increase accessibility, diversity and inclusivity

Nature biotechnology, 2022-01, Vol.40 (1), p.133-137

2022

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Bioinformatics Research and Applications: 19th International Symposium, ISBRA 2023, Wrocław, Poland, October 9-12, 2023, Proceedings

1, 2023

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Genomic reproducibility in the bioinformatics era

Genome Biology, 2024-08, Vol.25 (1), p.1-15, Article 213

2024

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Remote opportunities for scholars in Ukraine

Science (American Association for the Advancement of Science), 2022-12, Vol.378 (6626), p.1285-1286

2022

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Hidden Treasures in Contemporary RNA Sequencing

1st ed. 2019., 2019

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Estimation of alternative splicing isoform frequencies from RNA-Seq data

Algorithms for molecular biology, 2011-04, Vol.6 (1), p.9-9, Article 9

2011

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Author Correction: Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing

Nature communications, 2020-09, Vol.11 (1), p.1-1, Article 4499

2020

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RNA-seq data science: From raw data to effective interpretation

Frontiers in genetics, 2023-03, Vol.14, p.997383-997383

2023

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Improving the usability and comprehensiveness of microbial databases

BMC biology, 2020-04, Vol.18 (1), p.37-37, Article 37

2020

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Meta-analysis of (single-cell method) benchmarks reveals the need for extensibility and interoperability

Genome Biology, 2023-05, Vol.24 (1), p.119-11, Article 119

2023

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pyTCR: A comprehensive and scalable solution for TCR-Seq data analysis to facilitate reproducibility and rigor of immunogenomics research

Frontiers in immunology, 2022-10, Vol.13, p.954078-954078

2022

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The Pioneer Advantage: Filling the blank spots on the map of genome diversity in Europe

Gigascience, 2022-09, Vol.11

2022

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PUMAA: A Platform for Accessible Microbiome Analysis in the Undergraduate Classroom

Frontiers in microbiology, 2020-10, Vol.11, p.584699-584699

2020

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Fasting-Mimicking Diet Inhibits Autophagy and Synergizes with Chemotherapy to Promote T-Cell-Dependent Leukemia-Free Survival

Cancers, 2023-12, Vol.15 (24), p.5870

2023

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Correction to: Improving the usability and comprehensiveness of microbial databases

BMC biology, 2020-07, Vol.18 (1), p.1-92, Article 92

2020

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Corrigendum to: Recommendations to enhance rigor and reproducibility in biomedical research

Gigascience, 2020-09, Vol.9 (9)

2020

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Analytical code sharing practices in biomedical research

PeerJ. Computer science, 2024-06, Vol.10, p.e2066, Article e2066

2024

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The Genomic Landscape of Colorectal Cancer in the Saudi Arabian Population Using a Comprehensive Genomic Panel

Diagnostics (Basel), 2023-09, Vol.13 (18), p.2993

2023

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Metalign: efficient alignment-based metagenomic profiling via containment min hash

Improving the usability and archival stability of bioinformatics software

Early detection of emerging viral variants through analysis of community structure of coordinated substitution networks

A Comprehensive Map of Genetic Variation in the World's Largest Ethnic Group-Han Chinese

Addressing the Digital Divide in Contemporary Biology: Lessons from Teaching UNIX

Bioinformatics Research and Applications: 18th International Symposium, ISBRA 2022, Haifa, Israel, November 14-17, 2022, Proceedings

Virtual meetings promise to eliminate geographical and administrative barriers and increase accessibility, diversity and inclusivity

Bioinformatics Research and Applications: 19th International Symposium, ISBRA 2023, Wrocław, Poland, October 9-12, 2023, Proceedings

Genomic reproducibility in the bioinformatics era

Remote opportunities for scholars in Ukraine

Hidden Treasures in Contemporary RNA Sequencing

Estimation of alternative splicing isoform frequencies from RNA-Seq data

Author Correction: Profiling immunoglobulin repertoires across multiple human tissues using RNA sequencing

RNA-seq data science: From raw data to effective interpretation

Improving the usability and comprehensiveness of microbial databases

Meta-analysis of (single-cell method) benchmarks reveals the need for extensibility and interoperability

pyTCR: A comprehensive and scalable solution for TCR-Seq data analysis to facilitate reproducibility and rigor of immunogenomics research

The Pioneer Advantage: Filling the blank spots on the map of genome diversity in Europe

PUMAA: A Platform for Accessible Microbiome Analysis in the Undergraduate Classroom

Fasting-Mimicking Diet Inhibits Autophagy and Synergizes with Chemotherapy to Promote T-Cell-Dependent Leukemia-Free Survival

Correction to: Improving the usability and comprehensiveness of microbial databases

Corrigendum to: Recommendations to enhance rigor and reproducibility in biomedical research

Analytical code sharing practices in biomedical research

The Genomic Landscape of Colorectal Cancer in the Saudi Arabian Population Using a Comprehensive Genomic Panel

Pathogenesis, Symptomatology, and Transmission of SARS-CoV-2 through Analysis of Viral Genomics and Structure

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