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Protein dynamics and conformational disorder in molecular recognition

Journal of molecular recognition, 2010-03, Vol.23 (2), p.105-116

2010

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First-generation predictors of biological protein phase separation

Current opinion in structural biology, 2019-10, Vol.58, p.88-96

2019

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Entropy and Information within Intrinsically Disordered Protein Regions

Entropy (Basel, Switzerland), 2019-07, Vol.21 (7), p.662

2019

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Phosphoregulated FMRP phase separation models activity-dependent translation through bidirectional control of mRNA granule formation

Proceedings of the National Academy of Sciences - PNAS, 2019-03, Vol.116 (10), p.4218-4227

2019

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Phase Separation as a Missing Mechanism for Interpretation of Disease Mutations

Cell, 2020-12, Vol.183 (7), p.1742-1756

2020

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Sequence Determinants of Compaction in Intrinsically Disordered Proteins

Biophysical journal, 2010-05, Vol.98 (10), p.2383-2390

2010

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Charge pattern matching as a 'fuzzy' mode of molecular recognition for the functional phase separations of intrinsically disordered proteins

New journal of physics, 2017-11, Vol.19 (11), p.115003

2017

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Conformations of a Metastable SH3 Domain Characterized by smFRET and an Excluded-Volume Polymer Model

Biophysical journal, 2016-04, Vol.110 (7), p.1510-1522

2016

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Dynamic Protein Interaction Networks and New Structural Paradigms in Signaling

Chemical reviews, 2016-06, Vol.116 (11), p.6424-6462

2016

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Mapping the per-residue surface electrostatic potential of CAPRIN1 along its phase-separation trajectory

Proceedings of the National Academy of Sciences - PNAS, 2022-09, Vol.119 (36), p.e2210492119-e2210492119

2022

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Proteome-wide signatures of function in highly diverged intrinsically disordered regions

eLife, 2019-07, Vol.8

2019

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NMR insights into dynamic, multivalent interactions of intrinsically disordered regions: from discrete complexes to condensates

Essays in biochemistry, 2022-12, Vol.66 (7), p.863-873

2022

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Surface electrostatics dictate RNA-binding protein CAPRIN1 condensate concentration and hydrodynamic properties

The Journal of biological chemistry, 2023-01, Vol.299 (1), p.102776-102776, Article 102776

2023

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Ensemble modeling of protein disordered states: Experimental restraint contributions and validation

Proteins, structure, function, and bioinformatics, 2012-02, Vol.80 (2), p.556-572

2012

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Autism-Misregulated eIF4G Microexons Control Synaptic Translation and Higher Order Cognitive Functions

Molecular cell, 2020-03, Vol.77 (6), p.1176-1192.e16

2020

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pE-DB: a database of structural ensembles of intrinsically disordered and of unfolded proteins

Nucleic acids research, 2014-01, Vol.42 (Database issue), p.D326-D335

2014

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Identifying molecular features that are associated with biological function of intrinsically disordered protein regions

eLife, 2021-02, Vol.10

2021

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Dynamic equilibrium engagement of a polyvalent ligand with a single-site receptor

Proceedings of the National Academy of Sciences - PNAS, 2008-11, Vol.105 (46), p.17772-17777

2008

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Probing the diverse landscape of protein flexibility and binding

Current opinion in structural biology, 2012-10, Vol.22 (5), p.643-650

2012

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A change in conformational dynamics underlies the activation of Eph receptor tyrosine kinases

The EMBO journal, 2006-10, Vol.25 (19), p.4686-4696

2006

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Delineating Structural Propensities of the 4E-BP2 Protein via Integrative Modeling and Clustering

The journal of physical chemistry. B, 2023-08, Vol.127 (34), p.7472-7486

2023

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An Interpretable Machine-Learning Algorithm to Predict Disordered Protein Phase Separation Based on Biophysical Interactions

Biomolecules (Basel, Switzerland), 2022-08, Vol.12 (8), p.1131

2022

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Polyelectrostatic interactions of disordered ligands suggest a physical basis for ultrasensitivity

Proceedings of the National Academy of Sciences - PNAS, 2007-06, Vol.104 (23), p.9650-9655

2007

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RGG/RG Motif Regions in RNA Binding and Phase Separation

Journal of molecular biology, 2018-11, Vol.430 (23), p.4650-4665

2018

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Non-cooperative 4E-BP2 folding with exchange between eIF4E-binding and binding-incompatible states tunes cap-dependent translation inhibition

Nature communications, 2020-06, Vol.11 (1), p.3146-18, Article 3146

2020

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Protein dynamics and conformational disorder in molecular recognition

First-generation predictors of biological protein phase separation

Entropy and Information within Intrinsically Disordered Protein Regions

Phosphoregulated FMRP phase separation models activity-dependent translation through bidirectional control of mRNA granule formation

Phase Separation as a Missing Mechanism for Interpretation of Disease Mutations

Sequence Determinants of Compaction in Intrinsically Disordered Proteins

Charge pattern matching as a 'fuzzy' mode of molecular recognition for the functional phase separations of intrinsically disordered proteins

Conformations of a Metastable SH3 Domain Characterized by smFRET and an Excluded-Volume Polymer Model

Dynamic Protein Interaction Networks and New Structural Paradigms in Signaling

Mapping the per-residue surface electrostatic potential of CAPRIN1 along its phase-separation trajectory

Proteome-wide signatures of function in highly diverged intrinsically disordered regions

NMR insights into dynamic, multivalent interactions of intrinsically disordered regions: from discrete complexes to condensates

Surface electrostatics dictate RNA-binding protein CAPRIN1 condensate concentration and hydrodynamic properties

Ensemble modeling of protein disordered states: Experimental restraint contributions and validation

Autism-Misregulated eIF4G Microexons Control Synaptic Translation and Higher Order Cognitive Functions

pE-DB: a database of structural ensembles of intrinsically disordered and of unfolded proteins

Identifying molecular features that are associated with biological function of intrinsically disordered protein regions

Dynamic equilibrium engagement of a polyvalent ligand with a single-site receptor

Probing the diverse landscape of protein flexibility and binding

A change in conformational dynamics underlies the activation of Eph receptor tyrosine kinases

Delineating Structural Propensities of the 4E-BP2 Protein via Integrative Modeling and Clustering

An Interpretable Machine-Learning Algorithm to Predict Disordered Protein Phase Separation Based on Biophysical Interactions

Polyelectrostatic interactions of disordered ligands suggest a physical basis for ultrasensitivity

RGG/RG Motif Regions in RNA Binding and Phase Separation

Non-cooperative 4E-BP2 folding with exchange between eIF4E-binding and binding-incompatible states tunes cap-dependent translation inhibition

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