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Protection from DNA re-methylation by transcription factors in primordial germ cells and pre-implantation embryos can explain trans-generational epigenetic inheritance

Genome Biology, 2020-05, Vol.21 (1), p.118-118, Article 118

2020

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A CTCF Code for 3D Genome Architecture

Cell, 2015-08, Vol.162 (4), p.703-705

2015

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Gene Density, Transcription, and Insulators Contribute to the Partition of the Drosophila Genome into Physical Domains

Molecular cell, 2012-11, Vol.48 (3), p.471-484

2012

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Principles of 3D compartmentalization of the human genome

Cell reports (Cambridge), 2021-06, Vol.35 (13), p.109330-109330, Article 109330

2021

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Structural Basis for the Versatile and Methylation-Dependent Binding of CTCF to DNA

Molecular cell, 2017-06, Vol.66 (5), p.711-720.e3

2017

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Widespread Rearrangement of 3D Chromatin Organization Underlies Polycomb-Mediated Stress-Induced Silencing

Molecular cell, 2015-04, Vol.58 (2), p.216-231

2015

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Architectural Protein Subclasses Shape 3D Organization of Genomes during Lineage Commitment

Cell, 2013-06, Vol.153 (6), p.1281-1295

2013

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Architectural Proteins and Pluripotency Factors Cooperate to Orchestrate the Transcriptional Response of hESCs to Temperature Stress

Molecular cell, 2018-09, Vol.71 (6), p.940-955.e7

2018

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Chromatin States in Mouse Sperm Correlate with Embryonic and Adult Regulatory Landscapes

Cell reports (Cambridge), 2017-02, Vol.18 (6), p.1366-1382

2017

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Condensin II Counteracts Cohesin and RNA Polymerase II in the Establishment of 3D Chromatin Organization

Cell reports (Cambridge), 2019-03, Vol.26 (11), p.2890-2903.e3

2019

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Different enhancer classes in Drosophila bind distinct architectural proteins and mediate unique chromatin interactions and 3D architecture

Nucleic acids research, 2017-02, Vol.45 (4), p.1714-1730

2017

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Maintenance of CTCF- and Transcription Factor-Mediated Interactions from the Gametes to the Early Mouse Embryo

Molecular cell, 2019-07, Vol.75 (1), p.154-171.e5

2019

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Poly(ADP-ribosyl)ation Regulates Insulator Function and Intrachromosomal Interactions in Drosophila

Cell, 2013-09, Vol.155 (1), p.148-159

2013

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Analysis of Hi-C data using SIP effectively identifies loops in organisms from C. elegans to mammals

Genome research, 2020-03, Vol.30 (3), p.447-458

2020

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Nuclear Organization and Genome Function

Annual review of cell and developmental biology, 2012-01, Vol.28 (1), p.163-187

2012

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Local Genome Topology Can Exhibit an Incompletely Rewired 3D-Folding State during Somatic Cell Reprogramming

Cell stem cell, 2016-05, Vol.18 (5), p.611-624

2016

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Organizational principles of 3D genome architecture

Nature reviews. Genetics, 2018-12, Vol.19 (12), p.789-800

2018

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Chromatin Insulators: Regulatory Mechanisms and Epigenetic Inheritance

Molecular cell, 2008-10, Vol.32 (1), p.1-9

2008

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Phosphorylation of histone H3: a balancing act between chromosome condensation and transcriptional activation

Trends in genetics, 2004-04, Vol.20 (4), p.214-220

2004

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HiFive: a tool suite for easy and efficient HiC and 5C data analysis

Genome Biology, 2015-10, Vol.16 (1), p.237-237, Article 237

2015

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TDP-43 chronic deficiency leads to dysregulation of transposable elements and gene expression by affecting R-loop and 5hmC crosstalk

Cell reports (Cambridge), 2024-01, Vol.43 (1), p.113662-113662, Article 113662

2024

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Spinning the Web of Cell Fate

Cell, 2013-03, Vol.152 (6), p.1213-1217

2013

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Towards a predictive model of chromatin 3D organization

Seminars in cell & developmental biology, 2016-09, Vol.57, p.24-30

2016

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Expansion of the genotypic and phenotypic spectrum of CTCF‐related disorder guides clinical management: 43 new subjects and a comprehensive literature review

American journal of medical genetics. Part A, 2023-03, Vol.191 (3), p.718-729

2023

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Minute-Made Data Analysis: Tools for Rapid Interrogation of Hi-C Contacts

Molecular cell, 2016-10, Vol.64 (1), p.9-11

2016

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Protection from DNA re-methylation by transcription factors in primordial germ cells and pre-implantation embryos can explain trans-generational epigenetic inheritance

A CTCF Code for 3D Genome Architecture

Gene Density, Transcription, and Insulators Contribute to the Partition of the Drosophila Genome into Physical Domains

Principles of 3D compartmentalization of the human genome

Structural Basis for the Versatile and Methylation-Dependent Binding of CTCF to DNA

Widespread Rearrangement of 3D Chromatin Organization Underlies Polycomb-Mediated Stress-Induced Silencing

Architectural Protein Subclasses Shape 3D Organization of Genomes during Lineage Commitment

Architectural Proteins and Pluripotency Factors Cooperate to Orchestrate the Transcriptional Response of hESCs to Temperature Stress

Chromatin States in Mouse Sperm Correlate with Embryonic and Adult Regulatory Landscapes

Condensin II Counteracts Cohesin and RNA Polymerase II in the Establishment of 3D Chromatin Organization

Different enhancer classes in Drosophila bind distinct architectural proteins and mediate unique chromatin interactions and 3D architecture

Maintenance of CTCF- and Transcription Factor-Mediated Interactions from the Gametes to the Early Mouse Embryo

Poly(ADP-ribosyl)ation Regulates Insulator Function and Intrachromosomal Interactions in Drosophila

Analysis of Hi-C data using SIP effectively identifies loops in organisms from C. elegans to mammals

Nuclear Organization and Genome Function

Local Genome Topology Can Exhibit an Incompletely Rewired 3D-Folding State during Somatic Cell Reprogramming

Organizational principles of 3D genome architecture

Chromatin Insulators: Regulatory Mechanisms and Epigenetic Inheritance

Phosphorylation of histone H3: a balancing act between chromosome condensation and transcriptional activation

HiFive: a tool suite for easy and efficient HiC and 5C data analysis

TDP-43 chronic deficiency leads to dysregulation of transposable elements and gene expression by affecting R-loop and 5hmC crosstalk

Spinning the Web of Cell Fate

Towards a predictive model of chromatin 3D organization

Expansion of the genotypic and phenotypic spectrum of CTCF‐related disorder guides clinical management: 43 new subjects and a comprehensive literature review

Minute-Made Data Analysis: Tools for Rapid Interrogation of Hi-C Contacts

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