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Predicting MicroRNA-Disease Associations Based on Improved MicroRNA and Disease Similarities

IEEE/ACM transactions on computational biology and bioinformatics, 2018-11, Vol.15 (6), p.1774-1782

2018

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United Complex Centrality for Identification of Essential Proteins from PPI Networks

IEEE/ACM transactions on computational biology and bioinformatics, 2017-03, Vol.14 (2), p.370-380

2017

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DeepDSC: A Deep Learning Method to Predict Drug Sensitivity of Cancer Cell Lines

IEEE/ACM transactions on computational biology and bioinformatics, 2021-03, Vol.18 (2), p.575-582

2021

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Automated ICD-9 Coding via A Deep Learning Approach

IEEE/ACM transactions on computational biology and bioinformatics, 2019-07, Vol.16 (4), p.1193-1202

2019

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A Deep Learning Framework for Identifying Essential Proteins by Integrating Multiple Types of Biological Information

IEEE/ACM transactions on computational biology and bioinformatics, 2021-01, Vol.18 (1), p.296-305

2021

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Predicting Drug-Drug Interactions Based on Integrated Similarity and Semi-Supervised Learning

IEEE/ACM transactions on computational biology and bioinformatics, 2022-01, Vol.19 (1), p.168-179

2022

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Improving Alzheimer's Disease Classification by Combining Multiple Measures

IEEE/ACM transactions on computational biology and bioinformatics, 2018-09, Vol.15 (5), p.1649-1659

2018

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Construction of Refined Protein Interaction Network for Predicting Essential Proteins

IEEE/ACM transactions on computational biology and bioinformatics, 2019-07, Vol.16 (4), p.1386-1397

2019

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Classification of Alzheimer's Disease Using Whole Brain Hierarchical Network

IEEE/ACM transactions on computational biology and bioinformatics, 2018-03, Vol.15 (2), p.624-632

2018

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Prediction of Protein Backbone Torsion Angles Using Deep Residual Inception Neural Networks

IEEE/ACM transactions on computational biology and bioinformatics, 2019-05, Vol.16 (3), p.1020-1028

2019

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DMFLDA: A Deep Learning Framework for Predicting lncRNA-Disease Associations

IEEE/ACM transactions on computational biology and bioinformatics, 2021-11, Vol.18 (6), p.2353-2363

2021

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Constructing Disease Similarity Networks Based on Disease Module Theory

IEEE/ACM transactions on computational biology and bioinformatics, 2020-05, Vol.17 (3), p.906-915

2020

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BRWMDA:Predicting Microbe-Disease Associations Based on Similarities and Bi-Random Walk on Disease and Microbe Networks

IEEE/ACM transactions on computational biology and bioinformatics, 2020-09, Vol.17 (5), p.1595-1604

2020

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Biomarker Identification via a Factorization Machine-Based Neural Network With Binary Pairwise Encoding

IEEE/ACM transactions on computational biology and bioinformatics, 2023-05, Vol.20 (3), p.2136-2146

2023

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MCHMDA:Predicting Microbe-Disease Associations Based on Similarities and Low-Rank Matrix Completion

IEEE/ACM transactions on computational biology and bioinformatics, 2021-03, Vol.18 (2), p.611-620

2021

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Drug-Target Interaction Prediction Using Multi-Head Self-Attention and Graph Attention Network

IEEE/ACM transactions on computational biology and bioinformatics, 2022-07, Vol.19 (4), p.2208-2218

2022

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Artificial Fish Swarm Optimization Based Method to Identify Essential Proteins

IEEE/ACM transactions on computational biology and bioinformatics, 2020-03, Vol.17 (2), p.495-505

2020

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DNRLMF-MDA:Predicting microRNA-Disease Associations Based on Similarities of microRNAs and Diseases

IEEE/ACM transactions on computational biology and bioinformatics, 2019-01, Vol.16 (1), p.233-243

2019

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A Deep Learning Framework for Gene Ontology Annotations With Sequence- and Network-Based Information

IEEE/ACM transactions on computational biology and bioinformatics, 2021-11, Vol.18 (6), p.2208-2217

2021

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Computational Drug Repositioning with Random Walk on a Heterogeneous Network

IEEE/ACM transactions on computational biology and bioinformatics, 2019-11, Vol.16 (6), p.1890-1900

2019

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NMTF-DTI: A Nonnegative Matrix Tri-factorization Approach With Multiple Kernel Fusion for Drug-Target Interaction Prediction

IEEE/ACM transactions on computational biology and bioinformatics, 2023-01, Vol.20 (1), p.586-594

2023

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Identification of Protein Complexes by Using a Spatial and Temporal Active Protein Interaction Network

IEEE/ACM transactions on computational biology and bioinformatics, 2020-05, Vol.17 (3), p.817-827

2020

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Disease Gene Prediction by Integrating PPI Networks, Clinical RNA-Seq Data and OMIM Data

IEEE/ACM transactions on computational biology and bioinformatics, 2019-01, Vol.16 (1), p.222-232

2019

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ClusterViz: A Cytoscape APP for Cluster Analysis of Biological Network

IEEE/ACM transactions on computational biology and bioinformatics, 2015-07, Vol.12 (4), p.815-822

2015

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Identifying Gene Signatures for Cancer Drug Repositioning Based on Sample Clustering

IEEE/ACM transactions on computational biology and bioinformatics, 2022-03, Vol.19 (2), p.953-965

2022

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Predicting MicroRNA-Disease Associations Based on Improved MicroRNA and Disease Similarities

United Complex Centrality for Identification of Essential Proteins from PPI Networks

DeepDSC: A Deep Learning Method to Predict Drug Sensitivity of Cancer Cell Lines

Automated ICD-9 Coding via A Deep Learning Approach

A Deep Learning Framework for Identifying Essential Proteins by Integrating Multiple Types of Biological Information

Predicting Drug-Drug Interactions Based on Integrated Similarity and Semi-Supervised Learning

Improving Alzheimer's Disease Classification by Combining Multiple Measures

Construction of Refined Protein Interaction Network for Predicting Essential Proteins

Classification of Alzheimer's Disease Using Whole Brain Hierarchical Network

Prediction of Protein Backbone Torsion Angles Using Deep Residual Inception Neural Networks

DMFLDA: A Deep Learning Framework for Predicting lncRNA-Disease Associations

Constructing Disease Similarity Networks Based on Disease Module Theory

BRWMDA:Predicting Microbe-Disease Associations Based on Similarities and Bi-Random Walk on Disease and Microbe Networks

Biomarker Identification via a Factorization Machine-Based Neural Network With Binary Pairwise Encoding

MCHMDA:Predicting Microbe-Disease Associations Based on Similarities and Low-Rank Matrix Completion

Drug-Target Interaction Prediction Using Multi-Head Self-Attention and Graph Attention Network

Artificial Fish Swarm Optimization Based Method to Identify Essential Proteins

DNRLMF-MDA:Predicting microRNA-Disease Associations Based on Similarities of microRNAs and Diseases

A Deep Learning Framework for Gene Ontology Annotations With Sequence- and Network-Based Information

Computational Drug Repositioning with Random Walk on a Heterogeneous Network

NMTF-DTI: A Nonnegative Matrix Tri-factorization Approach With Multiple Kernel Fusion for Drug-Target Interaction Prediction

Identification of Protein Complexes by Using a Spatial and Temporal Active Protein Interaction Network

Disease Gene Prediction by Integrating PPI Networks, Clinical RNA-Seq Data and OMIM Data

ClusterViz: A Cytoscape APP for Cluster Analysis of Biological Network

Identifying Gene Signatures for Cancer Drug Repositioning Based on Sample Clustering

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