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Equation-free multiscale computation: algorithms and applications

Annual review of physical chemistry, 2009-01, Vol.60 (1), p.321-344

2009

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Detecting intrinsic slow variables in stochastic dynamical systems by anisotropic diffusion maps

Proceedings of the National Academy of Sciences - PNAS, 2009-09, Vol.106 (38), p.16090-16095

2009

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Task-oriented machine learning surrogates for tipping points of agent-based models

Nature communications, 2024-05, Vol.15 (1), p.4117-4117, Article 4117

2024

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Systematic characterization of protein folding pathways using diffusion maps: application to Trp-cage miniprotein

The Journal of chemical physics, 2015-02, Vol.142 (8), p.085101-085101

2015

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Diffusion maps, clustering and fuzzy Markov modeling in peptide folding transitions

The Journal of chemical physics, 2014-09, Vol.141 (11), p.114102-114102

2014

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Deciding the Nature of the Coarse Equation through Microscopic Simulations: The Baby-Bathwater Scheme

SIAM review, 2007-09, Vol.49 (3), p.469-487

2007

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Physics-agnostic and physics-infused machine learning for thin films flows: modelling, and predictions from small data

Journal of fluid mechanics, 2023-11, Vol.975, Article A41

2023

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A general CFD framework for fault-resilient simulations based on multi-resolution information fusion

Journal of computational physics, 2017-10, Vol.347, p.290-304

2017

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Large‐scale simulation of shallow water waves via computation only on small staggered patches

International journal for numerical methods in fluids, 2021-04, Vol.93 (4), p.953-977

2021

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Nonlinear intrinsic variables and state reconstruction in multiscale simulations

The Journal of chemical physics, 2013-11, Vol.139 (18), p.184109-184109

2013

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Projective methods for stiff differential equations: Problems with gaps in their eigenvalue spectrum

SIAM journal on scientific computing, 2003, Vol.24 (4), p.1091-1106

2003

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A constrained approach to multiscale stochastic simulation of chemically reacting systems

The Journal of chemical physics, 2011-09, Vol.135 (9), p.094102-094102-12

2011

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Accelerating agent-based computation of complex urban systems

International journal of geographical information science : IJGIS, 2012-10, Vol.26 (10), p.1917-1937

2012

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Constraint-Defined Manifolds: a Legacy Code Approach to Low-Dimensional Computation

Journal of scientific computing, 2005-10, Vol.25 (1), p.17-28

2005

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The Gap-Tooth Scheme for Homogenization Problems

Multiscale modeling & simulation, 2005-01, Vol.4 (1), p.278-306

2005

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Coarse-grained computation for particle coagulation and sintering processes by linking Quadrature Method of Moments with Monte-Carlo

Journal of computational physics, 2010-07, Vol.229 (14), p.5299-5314

2010

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Back in the Saddle Again: A Computer Assisted Study of the Kuramoto-Sivashinsky Equation

SIAM journal on applied mathematics, 1990-06, Vol.50 (3), p.760-790

1990

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Variance Reduction for the Equation‐Free Simulation of Multiscale Stochastic Systems

Multiscale modeling & simulation, 2007-01, Vol.6 (1), p.70-89

2007

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Constraint-defined manifolds: A legacy code approach to low-dimensional computation

Journal of scientific computing, 2005-11, Vol.25 (1-2), p.17-28

2005

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Equation-Free, Multiscale Computation for Unsteady Random Diffusion

Multiscale modeling & simulation, 2005-01, Vol.4 (3), p.915-935

2005

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Deciding the Nature of the Coarse Equation through Microscopic Simulations: The Baby-Bathwater Scheme

Multiscale modeling & simulation, 2003-01, Vol.1 (3), p.391-407

2003

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Unsteady Two-Dimensional Flows in Complex Geometries: Comparative Bifurcation Studies with Global Eigenfunction Expansions

SIAM journal on scientific computing, 1997-05, Vol.18 (3), p.775-805

1997

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Generation of networks with prescribed degree-dependent clustering

Optimization letters, 2011-08, Vol.5 (3), p.435-451

2011

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Equation-free multiscale computation: algorithms and applications

Detecting intrinsic slow variables in stochastic dynamical systems by anisotropic diffusion maps

Task-oriented machine learning surrogates for tipping points of agent-based models

Systematic characterization of protein folding pathways using diffusion maps: application to Trp-cage miniprotein

Diffusion maps, clustering and fuzzy Markov modeling in peptide folding transitions

Deciding the Nature of the Coarse Equation through Microscopic Simulations: The Baby-Bathwater Scheme

Physics-agnostic and physics-infused machine learning for thin films flows: modelling, and predictions from small data

A general CFD framework for fault-resilient simulations based on multi-resolution information fusion

Large‐scale simulation of shallow water waves via computation only on small staggered patches

Nonlinear intrinsic variables and state reconstruction in multiscale simulations

Projective methods for stiff differential equations: Problems with gaps in their eigenvalue spectrum

A constrained approach to multiscale stochastic simulation of chemically reacting systems

Accelerating agent-based computation of complex urban systems

Constraint-Defined Manifolds: a Legacy Code Approach to Low-Dimensional Computation

The Gap-Tooth Scheme for Homogenization Problems

Coarse-grained computation for particle coagulation and sintering processes by linking Quadrature Method of Moments with Monte-Carlo

Back in the Saddle Again: A Computer Assisted Study of the Kuramoto-Sivashinsky Equation

Variance Reduction for the Equation‐Free Simulation of Multiscale Stochastic Systems

Constraint-defined manifolds: A legacy code approach to low-dimensional computation

Equation-Free, Multiscale Computation for Unsteady Random Diffusion

Deciding the Nature of the Coarse Equation through Microscopic Simulations: The Baby-Bathwater Scheme

Unsteady Two-Dimensional Flows in Complex Geometries: Comparative Bifurcation Studies with Global Eigenfunction Expansions

Generation of networks with prescribed degree-dependent clustering

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