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Detection of phosphorylation post-translational modifications along single peptides with nanopores

Nature biotechnology, 2024-05, Vol.42 (5), p.710-714

2024

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Determining the effects of DNA sequence on Hel308 helicase translocation along single-stranded DNA using nanopore tweezers

Nucleic acids research, 2019-03, Vol.47 (5), p.2506

2019

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Tailored Polymeric Membranes for Mycobacterium Smegmatis Porin A (MspA) Based Biosensors

Journal of materials chemistry. B, Materials for biology and medicine, 2015-07, Vol.3 (25), p.5080-5086

2015

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Nanopore-tweezers analysis of translocation by Escherichia coli RNA polymerase and yeast RNA polymerase II

Biophysical journal, 2024-02, Vol.123 (3), p.167a-167a

2024

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Fractional‐nucleotide translocation in sequence‐dependent pausing by RNA polymerase: Single‐molecule picometer‐resolution nanopore tweezers (SPRNT)

The FASEB journal, 2019-04, Vol.33 (S1), p.221.1-221.1

2019

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SV40 Large T Antigen Helicase Unwinds Double-Stranded DNA in Single-Nucleotide Steps as Revealed by Nanopore Tweezers

Biophysical journal, 2020-02, Vol.118 (3), p.72a-72a

2020

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Uncovering the Molecular Basis for Sequence-Dependent Translocation in a Superfamily 2 Helicase using High-Resolution Nanopore Tweezers

Biophysical journal, 2020-02, Vol.118 (3), p.71a-71a

2020

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RNA Polymerase Transcription Elongation Pasuing and Termination Investigated at Super Resolution with the Mspa Nanopore

Biophysical journal, 2017-02, Vol.112 (3), p.212a-212a

2017

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Determining Dynamics of RNA Polymerase Elongation and Pausing using Nanopore Tweezers

Biophysical journal, 2019-02, Vol.116 (3), p.209a-209a

2019

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Tracking Single RNAP Enzyme Steps and State Transitions During Elongation and Pausing with Nanopore Tweezers

Biophysical journal, 2020-02, Vol.118 (3), p.29a-29a

2020

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Single-Molecule Picometer Resolution Nanopore Tweezers Resolution

Biophysical journal, 2017-02, Vol.112 (3), p.517a-517a

2017

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Nanopore Tweezers Reveal Detailed RNA Polymerase Dynamics at a Sequence-Specific Pause Element

Biophysical journal, 2018-02, Vol.114 (3), p.193a-193a

2018

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High Resolution Measurements of RNA Polymerase with Nanopore Tweezers

Nova, Ian C

2020

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Nanopore Sequencing of “Alien” DNA Bases

Biophysical journal, 2015-01, Vol.108 (2), p.481a-481a

2015

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Analysis of Force Dependence of Translocation and Unwinding of Helicase PCRA using SPRNT

Biophysical journal, 2018-02, Vol.114 (3), p.91a-91a

2018

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Direct Single Molecule Measurement of ATP Hydrolysis Substates in Hel308 DNA Helicase using Nanopore Tweezers

Biophysical journal, 2017-02, Vol.112 (3), p.169a-169a

2017

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Nanopore Subangstrom-Resolution Single-Molecule Tool

Biophysical journal, 2016-02, Vol.110 (3), p.333a-333a

2016

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Sub-angstrom single-molecule measurements of motor proteins using a nanopore

Nature biotechnology, 2015-09, Vol.33 (10), p.1073-1075

2015

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Direct Detection and Mapping of DNA Methylation in Single Molecules using Nanopore MspA

Biophysical journal, 2014-01, Vol.106 (2), p.214a-214a

2014

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Decoding Long Nanopore Reads of Bacteriophage Phi X 174

Biophysical journal, 2015-01, Vol.108 (2), p.630a-630a

2015

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Direct Detection of Unnatural DNA Nucleotides dNaM and d5SICS using the MspA Nanopore: e0143253

PloS one, 2015-11, Vol.10 (11)

2015

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Tailored polymeric membranes for Mycobacterium smegmatis porin A (MspA) based biosensorsElectronic supplementary information (ESI) available: Detailed protocols for membrane formation and data acquisition; membrane breakdown studies; polymer characterization; MspA pore I-V curves; noise dependence on bias spectra; additional current traces. See DOI: 10.1039/c5tb00383k

2015-06

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Sequence locally, think globally: The Darwin Tree of Life Project

Proceedings of the National Academy of Sciences - PNAS, 2022-01, Vol.119 (4), p.1

2022

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MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads

BMC bioinformatics, 2023-07, Vol.24 (1), p.288-288, Article 288

2023

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Maximizing fair content spread via edge suggestion in social networks

Proceedings of the VLDB Endowment, 2022-07, Vol.15 (11), p.2692-2705

2022

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Detection of phosphorylation post-translational modifications along single peptides with nanopores

Determining the effects of DNA sequence on Hel308 helicase translocation along single-stranded DNA using nanopore tweezers

Tailored Polymeric Membranes for Mycobacterium Smegmatis Porin A (MspA) Based Biosensors

Nanopore-tweezers analysis of translocation by Escherichia coli RNA polymerase and yeast RNA polymerase II

Fractional‐nucleotide translocation in sequence‐dependent pausing by RNA polymerase: Single‐molecule picometer‐resolution nanopore tweezers (SPRNT)

SV40 Large T Antigen Helicase Unwinds Double-Stranded DNA in Single-Nucleotide Steps as Revealed by Nanopore Tweezers

Uncovering the Molecular Basis for Sequence-Dependent Translocation in a Superfamily 2 Helicase using High-Resolution Nanopore Tweezers

RNA Polymerase Transcription Elongation Pasuing and Termination Investigated at Super Resolution with the Mspa Nanopore

Determining Dynamics of RNA Polymerase Elongation and Pausing using Nanopore Tweezers

Tracking Single RNAP Enzyme Steps and State Transitions During Elongation and Pausing with Nanopore Tweezers

Single-Molecule Picometer Resolution Nanopore Tweezers Resolution

Nanopore Tweezers Reveal Detailed RNA Polymerase Dynamics at a Sequence-Specific Pause Element

High Resolution Measurements of RNA Polymerase with Nanopore Tweezers

Nanopore Sequencing of “Alien” DNA Bases

Analysis of Force Dependence of Translocation and Unwinding of Helicase PCRA using SPRNT

Direct Single Molecule Measurement of ATP Hydrolysis Substates in Hel308 DNA Helicase using Nanopore Tweezers

Nanopore Subangstrom-Resolution Single-Molecule Tool

Sub-angstrom single-molecule measurements of motor proteins using a nanopore

Direct Detection and Mapping of DNA Methylation in Single Molecules using Nanopore MspA

Decoding Long Nanopore Reads of Bacteriophage Phi X 174

Direct Detection of Unnatural DNA Nucleotides dNaM and d5SICS using the MspA Nanopore: e0143253

Sequence locally, think globally: The Darwin Tree of Life Project

MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads

Maximizing fair content spread via edge suggestion in social networks

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