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InterPro in 2022

Nucleic acids research, 2023-01, Vol.51 (D1), p.D418-D427

2023

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CATH: increased structural coverage of functional space

Nucleic acids research, 2021-01, Vol.49 (D1), p.D266-D273

2021

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The InterPro protein families and domains database: 20 years on

Nucleic acids research, 2021-01, Vol.49 (D1), p.D344-D354

2021

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CATH: expanding the horizons of structure-based functional annotations for genome sequences

Nucleic acids research, 2019-01, Vol.47 (D1), p.D280-D284

2019

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Functional classification of CATH superfamilies: a domain-based approach for protein function annotation

Bioinformatics, 2015-11, Vol.31 (21), p.3460-3467

2015

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Generating functional protein variants with variational autoencoders

PLoS computational biology, 2021-02, Vol.17 (2), p.e1008736-e1008736

2021

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Protein function annotation using protein domain family resources

Methods (San Diego, Calif.), 2016-01, Vol.93, p.24-34

2016

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Domain-Based and Family-Specific Sequence Identity Thresholds Increase the Levels of Reliable Protein Function Transfer

Journal of molecular biology, 2009-03, Vol.387 (2), p.416-430

2009

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Biases in the experimental annotations of protein function and their effect on our understanding of protein function space

PLoS computational biology, 2013-05, Vol.9 (5), p.e1003063-e1003063

2013

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The complexity of protein interactions unravelled from structural disorder

PLoS computational biology, 2021-01, Vol.17 (1), p.e1008546-e1008546

2021

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Structural Diversity of Domain Superfamilies in the CATH Database

Journal of molecular biology, 2006-07, Vol.360 (3), p.725-741

2006

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Structural and Energetic Characterization of the Ankyrin Repeat Protein Family

PLoS computational biology, 2015-12, Vol.11 (12), p.e1004659-e1004659

2015

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An Atlas of Peroxiredoxins Created Using an Active Site Profile-Based Approach to Functionally Relevant Clustering of Proteins

PLoS computational biology, 2017-02, Vol.13 (2), p.e1005284-e1005284

2017

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Diversity in protein domain superfamilies

Current opinion in genetics & development, 2015-12, Vol.35, p.40-49

2015

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Exploring fold space preferences of new-born and ancient protein superfamilies

PLoS computational biology, 2013-11, Vol.9 (11), p.e1003325-e1003325

2013

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The Classification of Protein Domains

Methods in molecular biology (Clifton, N.J.), 2017, Vol.1525, p.137

2017

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One Fold with Many Functions: The Evolutionary Relationships between TIM Barrel Families Based on their Sequences, Structures and Functions

Journal of Molecular Biology, 2002-08, Vol.321 (5), p.741-765

2002

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Editorial overview: Sequences and topology: sequences, structures, genomes and populations

Current opinion in structural biology, 2014-06, Vol.26, p.vii-viii

2014

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Quantitative comparison of catalytic mechanisms and overall reactions in convergently evolved enzymes: implications for classification of enzyme function

PLoS computational biology, 2010-03, Vol.6 (3), p.e1000700-e1000700

2010

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Plasticity of enzyme active sites

Trends in Biochemical Sciences, 2002-08, Vol.27 (8), p.419-426

2002

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Assigning genomic sequences to CATH

Nucleic acids research, 2000-01, Vol.28 (1), p.277-282

2000

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1,000 structures and more from the MCSG

BMC structural biology, 2011-01, Vol.11 (1), p.2-2

2011

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Exploring structural diversity across the protein universe with The Encyclopedia of Domains

Science (American Association for the Advancement of Science), 2024-11, Vol.386 (6721), p.eadq4946

2024

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Fast structure alignment for protein databank searching

Proteins, structure, function, and bioinformatics, 1992-10, Vol.14 (2), p.139-167

1992

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Multiple protein structure alignment

Protein science, 1994-10, Vol.3 (10), p.1858-1870

1994

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InterPro in 2022

CATH: increased structural coverage of functional space

The InterPro protein families and domains database: 20 years on

CATH: expanding the horizons of structure-based functional annotations for genome sequences

Functional classification of CATH superfamilies: a domain-based approach for protein function annotation

Generating functional protein variants with variational autoencoders

Protein function annotation using protein domain family resources

Domain-Based and Family-Specific Sequence Identity Thresholds Increase the Levels of Reliable Protein Function Transfer

Biases in the experimental annotations of protein function and their effect on our understanding of protein function space

The complexity of protein interactions unravelled from structural disorder

Structural Diversity of Domain Superfamilies in the CATH Database

Structural and Energetic Characterization of the Ankyrin Repeat Protein Family

An Atlas of Peroxiredoxins Created Using an Active Site Profile-Based Approach to Functionally Relevant Clustering of Proteins

Diversity in protein domain superfamilies

Exploring fold space preferences of new-born and ancient protein superfamilies

The Classification of Protein Domains

One Fold with Many Functions: The Evolutionary Relationships between TIM Barrel Families Based on their Sequences, Structures and Functions

Editorial overview: Sequences and topology: sequences, structures, genomes and populations

Quantitative comparison of catalytic mechanisms and overall reactions in convergently evolved enzymes: implications for classification of enzyme function

Plasticity of enzyme active sites

Assigning genomic sequences to CATH

1,000 structures and more from the MCSG

Exploring structural diversity across the protein universe with The Encyclopedia of Domains

Fast structure alignment for protein databank searching

Multiple protein structure alignment

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