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An Epigenome-Wide DNA Methylation Map of Testis in Pigs for Study of Complex Traits

Frontiers in genetics, 2019-04, Vol.10, p.405-405

2019

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Host Genome-Metagenome Analyses Using Combinatorial Network Methods Reveal Key Metagenomic and Host Genetic Features for Methane Emission and Feed Efficiency in Cattle

Frontiers in genetics, 2022-02, Vol.13, p.795717-795717

2022

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Metabolomic networks and pathways associated with feed efficiency and related-traits in Duroc and Landrace pigs

Scientific reports, 2020-01, Vol.10 (1), p.255-255, Article 255

2020

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Inter-Tissue Gene Co-Expression Networks between Metabolically Healthy and Unhealthy Obese Individuals

PloS one, 2016-12, Vol.11 (12), p.e0167519-e0167519

2016

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Genome-Wide Epistatic Interaction Networks Affecting Feed Efficiency in Duroc and Landrace Pigs

Frontiers in genetics, 2020-02, Vol.11, p.121-121

2020

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Metabolomics Analyses in High-Low Feed Efficient Dairy Cows Reveal Novel Biochemical Mechanisms and Predictive Biomarkers

Metabolites, 2019-07, Vol.9 (7), p.151

2019

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Metabolite Genome-Wide Association Study (mGWAS) and Gene-Metabolite Interaction Network Analysis Reveal Potential Biomarkers for Feed Efficiency in Pigs

Metabolites, 2020-05, Vol.10 (5), p.201

2020

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Gene co-expression networks in liver and muscle transcriptome reveal sex-specific gene expression in lambs fed with a mix of essential oils

BMC genomics, 2018-04, Vol.19 (1), p.236-15, Article 236

2018

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Genome Regulation and Gene Interaction Networks Inferred From Muscle Transcriptome Underlying Feed Efficiency in Pigs

Frontiers in genetics, 2020-06, Vol.11, p.650-650

2020

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Characterization of Global DNA Methylation in Different Gene Regions Reveals Candidate Biomarkers in Pigs with High and Low Levels of Boar Taint

Veterinary sciences, 2020-06, Vol.7 (2), p.77

2020

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WISH-R- a fast and efficient tool for construction of epistatic networks for complex traits and diseases

BMC bioinformatics, 2018-07, Vol.19 (1), p.277-277, Article 277

2018

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Integrative Analysis of Metabolomic and Transcriptomic Profiles Uncovers Biological Pathways of Feed Efficiency in Pigs

Metabolites, 2020-07, Vol.10 (7), p.275

2020

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Genome-wide association and pathway analysis of feed efficiency in pigs reveal candidate genes and pathways for residual feed intake

Frontiers in genetics, 2014-09, Vol.5, p.307-307

2014

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Genomic analyses suggest adaptive differentiation of northern European native cattle breeds

Evolutionary applications, 2019-06, Vol.12 (6), p.1096-1113

2019

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A genome-wide association study of thyroid stimulating hormone and free thyroxine in Danish children and adolescents

PloS one, 2017-03, Vol.12 (3), p.e0174204-e0174204

2017

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Systems Biology in Animal Production and Health, Vol. 2

1, 2016

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Interplay among miR-29 family, mineral metabolism, and gene regulation in Bos indicus muscle

Molecular genetics and genomics : MGG, 2020-09, Vol.295 (5), p.1113-1127

2020

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Differential impacts of late gestational over–and undernutrition on adipose tissue traits and associated visceral obesity risk upon exposure to a postnatal high‐fat diet in adolescent sheep

Physiological reports, 2020-02, Vol.8 (3), p.e14359-n/a

2020

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Detection of Co-expressed Pathway Modules Associated With Mineral Concentration and Meat Quality in Nelore Cattle

Frontiers in genetics, 2019-03, Vol.10, p.210-210

2019

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Systems Biology in Animal Production and Health, Vol. 1

1, 2016

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Transcription Factor Co-expression Networks of Adipose RNA-Seq Data Reveal Regulatory Mechanisms of Obesity

Current genomics, 2018-05, Vol.19 (4), p.289-299

2018

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Weighted Interaction SNP Hub (WISH) network method for building genetic networks for complex diseases and traits using whole genome genotype data

BMC systems biology, 2014, Vol.8 Suppl 2 (Suppl 2), p.S5-S5

2014

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Comparisons of improved genomic predictions generated by different imputation methods for genotyping by sequencing data in livestock populations

Journal of animal science and biotechnology, 2020-01, Vol.11 (1), p.3-3, Article 3

2020

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Genetic Parameters and Genome-Wide Association Studies for Anti-Müllerian Hormone Levels and Antral Follicle Populations Measured After Estrus Synchronization in Nellore Cattle

Animals (Basel), 2020-07, Vol.10 (7), p.1185

2020

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GeneDMRs: An R Package for Gene-Based Differentially Methylated Regions Analysis

Journal of computational biology, 2021-03, Vol.28 (3), p.304

2021

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An Epigenome-Wide DNA Methylation Map of Testis in Pigs for Study of Complex Traits

Host Genome-Metagenome Analyses Using Combinatorial Network Methods Reveal Key Metagenomic and Host Genetic Features for Methane Emission and Feed Efficiency in Cattle

Metabolomic networks and pathways associated with feed efficiency and related-traits in Duroc and Landrace pigs

Inter-Tissue Gene Co-Expression Networks between Metabolically Healthy and Unhealthy Obese Individuals

Genome-Wide Epistatic Interaction Networks Affecting Feed Efficiency in Duroc and Landrace Pigs

Metabolomics Analyses in High-Low Feed Efficient Dairy Cows Reveal Novel Biochemical Mechanisms and Predictive Biomarkers

Metabolite Genome-Wide Association Study (mGWAS) and Gene-Metabolite Interaction Network Analysis Reveal Potential Biomarkers for Feed Efficiency in Pigs

Gene co-expression networks in liver and muscle transcriptome reveal sex-specific gene expression in lambs fed with a mix of essential oils

Genome Regulation and Gene Interaction Networks Inferred From Muscle Transcriptome Underlying Feed Efficiency in Pigs

Characterization of Global DNA Methylation in Different Gene Regions Reveals Candidate Biomarkers in Pigs with High and Low Levels of Boar Taint

WISH-R- a fast and efficient tool for construction of epistatic networks for complex traits and diseases

Integrative Analysis of Metabolomic and Transcriptomic Profiles Uncovers Biological Pathways of Feed Efficiency in Pigs

Genome-wide association and pathway analysis of feed efficiency in pigs reveal candidate genes and pathways for residual feed intake

Genomic analyses suggest adaptive differentiation of northern European native cattle breeds

A genome-wide association study of thyroid stimulating hormone and free thyroxine in Danish children and adolescents

Systems Biology in Animal Production and Health, Vol. 2

Interplay among miR-29 family, mineral metabolism, and gene regulation in Bos indicus muscle

Differential impacts of late gestational over–and undernutrition on adipose tissue traits and associated visceral obesity risk upon exposure to a postnatal high‐fat diet in adolescent sheep

Detection of Co-expressed Pathway Modules Associated With Mineral Concentration and Meat Quality in Nelore Cattle

Systems Biology in Animal Production and Health, Vol. 1

Transcription Factor Co-expression Networks of Adipose RNA-Seq Data Reveal Regulatory Mechanisms of Obesity

Weighted Interaction SNP Hub (WISH) network method for building genetic networks for complex diseases and traits using whole genome genotype data

Comparisons of improved genomic predictions generated by different imputation methods for genotyping by sequencing data in livestock populations

Genetic Parameters and Genome-Wide Association Studies for Anti-Müllerian Hormone Levels and Antral Follicle Populations Measured After Estrus Synchronization in Nellore Cattle

GeneDMRs: An R Package for Gene-Based Differentially Methylated Regions Analysis

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