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A review of variable selection methods in Partial Least Squares Regression

Chemometrics and intelligent laboratory systems, 2012-08, Vol.118, p.62-69

2012

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Stable Core Gut Microbiota across the Freshwater-to-Saltwater Transition for Farmed Atlantic Salmon

Applied and environmental microbiology, 2018-01, Vol.84 (2)

2018

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Evolution of the immune system influences speciation rates in teleost fishes

Nature genetics, 2016-10, Vol.48 (10), p.1204-1210

2016

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Transcriptomic and functional analysis of NaCl-induced stress in Enterococcus faecalis

PloS one, 2014-04, Vol.9 (4), p.e94571

2014

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HumGut: a comprehensive human gut prokaryotic genomes collection filtered by metagenome data

Microbiome, 2021-07, Vol.9 (1), p.1-12, Article 165

2021

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Metagenome-mining indicates an association between bacteriocin presence and strain diversity in the infant gut

BMC genomics, 2023-05, Vol.24 (1), p.295-12, Article 295

2023

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Body fluid prediction from microbial patterns for forensic application

Forensic science international : genetics, 2017-09, Vol.30, p.10-17

2017

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Predicting the origin of stains from next generation sequencing mRNA data

Forensic science international : genetics, 2018-05, Vol.34, p.37-48

2018

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Optimizing body fluid recognition from microbial taxonomic profiles

Forensic science international : genetics, 2018-11, Vol.37, p.13-20

2018

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Questioning the Quality of 16S rRNA Gene Sequences Derived From Human Gut Metagenome-Assembled Genomes

Frontiers in microbiology, 2022-02, Vol.12, p.822301-822301

2022

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Comparative genomics of Enterococcus faecalis from healthy Norwegian infants

BMC genomics, 2009-04, Vol.10 (194), p.194-194

2009

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A Globally Distributed Bacteroides caccae Strain Is the Most Prevalent Mother-Child Shared Bacteroidaceae Strain in a Large Scandinavian Cohort

Applied and environmental microbiology, 2023-07, Vol.89 (7), p.e0078923-e0078923

2023

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Rapid Succession of Actively Transcribing Denitrifier Populations in Agricultural Soil During an Anoxic Spell

Frontiers in microbiology, 2019-01, Vol.9, p.3208-3208

2019

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Comparative genomic analysis reveals significant enrichment of mobile genetic elements and genes encoding surface structure-proteins in hospital-associated clonal complex 2 Enterococcus faecalis

BMC microbiology, 2011-01, Vol.11 (1), p.3-3

2011

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Reduced metagenome sequencing for strain-resolution taxonomic profiles

Microbiome, 2021-03, Vol.9 (1), p.79-79, Article 79

2021

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Microbial comparative pan-genomics using binomial mixture models

BMC genomics, 2009-08, Vol.10 (1), p.385-385

2009

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The Abi Proteins and Their Involvement in Bacteriocin Self-Immunity

Journal of Bacteriology, 2010-04, Vol.192 (8), p.2068-2076

2010

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Target recognition, resistance, immunity and genome mining of class II bacteriocins from Gram-positive bacteria

Microbiology (Society for General Microbiology), 2011-12, Vol.157 (Pt 12), p.3256-3267

2011

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Effects of glucose availability in Lactobacillus sakei; metabolic change and regulation of the proteome and transcriptome

PloS one, 2017-11, Vol.12 (11), p.e0187542-e0187542

2017

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Global transcriptome response in Lactobacillus sakei during growth on ribose

BMC microbiology, 2011-06, Vol.11 (1), p.145-145

2011

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Comparative genomic analysis of pathogenic and probiotic Enterococcus faecalis isolates, and their transcriptional responses to growth in human urine

PloS one, 2010-08, Vol.5 (8), p.e12489-e12489

2010

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Genomic characterization of Campylobacter jejuni strain M1

PloS one, 2010-08, Vol.5 (8), p.e12253-e12253

2010

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The transcriptome of the nosocomial pathogen Enterococcus faecalis V583 reveals adaptive responses to growth in blood

PloS one, 2009-11, Vol.4 (11), p.e7660-e7660

2009

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Analysis of intra-genomic GC content homogeneity within prokaryotes

BMC genomics, 2010-08, Vol.11 (1), p.464-464

2010

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A genomic virulence reference map of Enterococcus faecalis reveals an important contribution of phage03-like elements in nosocomial genetic lineages to pathogenicity in a Caenorhabditis elegans infection model

Infection and immunity, 2015-05, Vol.83 (5), p.2156-2167

2015

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A review of variable selection methods in Partial Least Squares Regression

Stable Core Gut Microbiota across the Freshwater-to-Saltwater Transition for Farmed Atlantic Salmon

Evolution of the immune system influences speciation rates in teleost fishes

Transcriptomic and functional analysis of NaCl-induced stress in Enterococcus faecalis

HumGut: a comprehensive human gut prokaryotic genomes collection filtered by metagenome data

Metagenome-mining indicates an association between bacteriocin presence and strain diversity in the infant gut

Body fluid prediction from microbial patterns for forensic application

Predicting the origin of stains from next generation sequencing mRNA data

Optimizing body fluid recognition from microbial taxonomic profiles

Questioning the Quality of 16S rRNA Gene Sequences Derived From Human Gut Metagenome-Assembled Genomes

Comparative genomics of Enterococcus faecalis from healthy Norwegian infants

A Globally Distributed Bacteroides caccae Strain Is the Most Prevalent Mother-Child Shared Bacteroidaceae Strain in a Large Scandinavian Cohort

Rapid Succession of Actively Transcribing Denitrifier Populations in Agricultural Soil During an Anoxic Spell

Comparative genomic analysis reveals significant enrichment of mobile genetic elements and genes encoding surface structure-proteins in hospital-associated clonal complex 2 Enterococcus faecalis

Reduced metagenome sequencing for strain-resolution taxonomic profiles

Microbial comparative pan-genomics using binomial mixture models

The Abi Proteins and Their Involvement in Bacteriocin Self-Immunity

Target recognition, resistance, immunity and genome mining of class II bacteriocins from Gram-positive bacteria

Effects of glucose availability in Lactobacillus sakei; metabolic change and regulation of the proteome and transcriptome

Global transcriptome response in Lactobacillus sakei during growth on ribose

Comparative genomic analysis of pathogenic and probiotic Enterococcus faecalis isolates, and their transcriptional responses to growth in human urine

Genomic characterization of Campylobacter jejuni strain M1

The transcriptome of the nosocomial pathogen Enterococcus faecalis V583 reveals adaptive responses to growth in blood

Analysis of intra-genomic GC content homogeneity within prokaryotes

A genomic virulence reference map of Enterococcus faecalis reveals an important contribution of phage03-like elements in nosocomial genetic lineages to pathogenicity in a Caenorhabditis elegans infection model

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