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Revealing the bacterial butyrate synthesis pathways by analyzing (meta)genomic data

mBio, 2014-04, Vol.5 (2), p.e00889-e00889

2014

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Analysis of Transcriptionally Active Bacteria Throughout the Gastrointestinal Tract of Healthy Individuals

Gastroenterology (New York, N.Y. 1943), 2019-10, Vol.157 (4), p.1081-1092.e3

2019

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Potential TMA-Producing Bacteria Are Ubiquitously Found in Mammalia

Frontiers in microbiology, 2020-01, Vol.10, p.2966-2966

2020

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Stabilization of flux during dead-end ultra-low pressure ultrafiltration

Water research (Oxford), 2010-06, Vol.44 (12), p.3607-3616

2010

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Investigating the response of the butyrate production potential to major fibers in dietary intervention studies

NPJ biofilms and microbiomes, 2024-07, Vol.10 (1), p.63-10, Article 63

2024

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Insights into Broilers' Gut Microbiota Fed with Phosphorus, Calcium, and Phytase Supplemented Diets

Frontiers in microbiology, 2016-12, Vol.7, p.2033-2033

2016

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Diet is a major factor governing the fecal butyrate-producing community structure across Mammalia, Aves and Reptilia

The ISME Journal, 2015-03, Vol.9 (4), p.832-843

2015

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Fusobacterium and colorectal cancer: causal factor or passenger? Results from a large colorectal cancer screening study

Carcinogenesis (New York), 2017-08, Vol.38 (8), p.781-788

2017

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Ursodeoxycholic Acid and Its Taurine- or Glycine-Conjugated Species Reduce Colitogenic Dysbiosis and Equally Suppress Experimental Colitis in Mice

Applied and environmental microbiology, 2017-04, Vol.83 (7), p.E02766

2017

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Escherichia coli O157 can grow in natural freshwater at low carbon concentrations

Environmental microbiology, 2008-09, Vol.10 (9), p.2387-2396

2008

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Diversity of Bacteria Exhibiting Bile Acid-inducible 7α-dehydroxylation Genes in the Human Gut

Computational and structural biotechnology journal, 2019-01, Vol.17, p.1016-1019

2019

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The urinary microbiota of men and women and its changes in women during bacterial vaginosis and antibiotic treatment

Microbiome, 2017-08, Vol.5 (1), p.99-99, Article 99

2017

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Eradication of Chronic HCV Infection: Improvement of Dysbiosis Only in Patients Without Liver Cirrhosis

Hepatology (Baltimore, Md.), 2021-07, Vol.74 (1), p.72-82

2021

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Diversity and community composition of particle-associated and free-living bacteria in mesopelagic and bathypelagic Southern Ocean water masses: Evidence of dispersal limitation in the Bransfield Strait

Limnology and oceanography, 2017-05, Vol.62 (3), p.1080-1095

2017

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A combination of genetics and microbiota influences the severity of the obesity phenotype in diet-induced obesity

Scientific reports, 2020-04, Vol.10 (1), p.6118-6118, Article 6118

2020

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Neonatally imprinted stromal cell subsets induce tolerogenic dendritic cells in mesenteric lymph nodes

Nature communications, 2018-09, Vol.9 (1), p.3903-14, Article 3903

2018

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Richness estimation in microbiome data obtained from denoising pipelines

Computational and structural biotechnology journal, 2022-01, Vol.20, p.508-520

2022

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Epidemiology and infection control of Methicillin-resistant Staphylococcus aureus in a German tertiary neonatal intensive and intermediate care unit: A retrospective study (2013–2020)

PloS one, 2022-09, Vol.17 (9), p.e0275087-e0275087

2022

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Decrease in acetyl-CoA pathway utilizing butyrate-producing bacteria is a key pathogenic feature of alcohol-induced functional gut microbial dysbiosis and development of liver disease in mice

Gut microbes, 2021-01, Vol.13 (1), p.1946367-1946367

2021

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Staphylococcus aureus Multiplexes Death-Effector Deoxyribonucleosides to Neutralize Phagocytes

Frontiers in immunology, 2022-03, Vol.13, p.847171-847171

2022

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Starch and Fiber Contents of Purified Control Diets Differentially Affect Hepatic Lipid Homeostasis and Gut Microbiota Composition

Frontiers in nutrition (Lausanne), 2022-07, Vol.9, p.915082-915082

2022

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The Resistance Mechanism Governs Physiological Adaptation of Escherichia coli to Growth With Sublethal Concentrations of Carbapenem

Frontiers in microbiology, 2022-01, Vol.12, p.812544-812544

2022

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Data Analysis Strategies for Microbiome Studies in Human Populations-a Systematic Review of Current Practice

mSystems, 2021-02, Vol.6 (1)

2021

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The impact of proton pump inhibitors on the intestinal microbiota in chronic hepatitis C patients

Scandinavian journal of gastroenterology, 2019-08, Vol.54 (8), p.1033-1041

2019

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Engraftment of essential functions through multiple fecal microbiota transplants in chronic antibiotic-resistant pouchitis—a case study using metatranscriptomics

Microbiome, 2023-12, Vol.11 (1), p.1-269, Article 269

2023

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Revealing the bacterial butyrate synthesis pathways by analyzing (meta)genomic data

Analysis of Transcriptionally Active Bacteria Throughout the Gastrointestinal Tract of Healthy Individuals

Potential TMA-Producing Bacteria Are Ubiquitously Found in Mammalia

Stabilization of flux during dead-end ultra-low pressure ultrafiltration

Investigating the response of the butyrate production potential to major fibers in dietary intervention studies

Insights into Broilers' Gut Microbiota Fed with Phosphorus, Calcium, and Phytase Supplemented Diets

Diet is a major factor governing the fecal butyrate-producing community structure across Mammalia, Aves and Reptilia

Fusobacterium and colorectal cancer: causal factor or passenger? Results from a large colorectal cancer screening study

Ursodeoxycholic Acid and Its Taurine- or Glycine-Conjugated Species Reduce Colitogenic Dysbiosis and Equally Suppress Experimental Colitis in Mice

Escherichia coli O157 can grow in natural freshwater at low carbon concentrations

Diversity of Bacteria Exhibiting Bile Acid-inducible 7α-dehydroxylation Genes in the Human Gut

The urinary microbiota of men and women and its changes in women during bacterial vaginosis and antibiotic treatment

Eradication of Chronic HCV Infection: Improvement of Dysbiosis Only in Patients Without Liver Cirrhosis

Diversity and community composition of particle-associated and free-living bacteria in mesopelagic and bathypelagic Southern Ocean water masses: Evidence of dispersal limitation in the Bransfield Strait

A combination of genetics and microbiota influences the severity of the obesity phenotype in diet-induced obesity

Neonatally imprinted stromal cell subsets induce tolerogenic dendritic cells in mesenteric lymph nodes

Richness estimation in microbiome data obtained from denoising pipelines

Epidemiology and infection control of Methicillin-resistant Staphylococcus aureus in a German tertiary neonatal intensive and intermediate care unit: A retrospective study (2013–2020)

Decrease in acetyl-CoA pathway utilizing butyrate-producing bacteria is a key pathogenic feature of alcohol-induced functional gut microbial dysbiosis and development of liver disease in mice

Staphylococcus aureus Multiplexes Death-Effector Deoxyribonucleosides to Neutralize Phagocytes

Starch and Fiber Contents of Purified Control Diets Differentially Affect Hepatic Lipid Homeostasis and Gut Microbiota Composition

The Resistance Mechanism Governs Physiological Adaptation of Escherichia coli to Growth With Sublethal Concentrations of Carbapenem

Data Analysis Strategies for Microbiome Studies in Human Populations-a Systematic Review of Current Practice

The impact of proton pump inhibitors on the intestinal microbiota in chronic hepatitis C patients

Engraftment of essential functions through multiple fecal microbiota transplants in chronic antibiotic-resistant pouchitis—a case study using metatranscriptomics

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