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The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats

BMC bioinformatics, 2007-05, Vol.8 (1), p.172-172, Article 172

2007

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CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins

Nucleic acids research, 2018-07, Vol.46 (W1), p.W246-W251

2018

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CRISPRCasdb a successor of CRISPRdb containing CRISPR arrays and cas genes from complete genome sequences, and tools to download and query lists of repeats and spacers

Nucleic acids research, 2020-01, Vol.48 (D1), p.D535

2020

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Investigation of Pseudomonas aeruginosa strain PcyII-10 variants resisting infection by N4-like phage Ab09 in search for genes involved in phage adsorption

PloS one, 2019-04, Vol.14 (4), p.e0215456-e0215456

2019

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Genomic Diversity and Zoonotic Potential of Brucella neotomae

Emerging infectious diseases, 2024-01, Vol.30 (1), p.155-158

2024

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Genotypic Expansion Within the Population Structure of Classical Brucella Species Revealed by MLVA16 Typing of 1404 Brucella Isolates From Different Animal and Geographic Origins, 1974-2006

Frontiers in microbiology, 2018-07, Vol.9, p.1545-1545

2018

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Comparison of French and Worldwide Bacillus anthracis Strains Favors a Recent, Post-Columbian Origin of the Predominant North-American Clade

PloS one, 2016-02, Vol.11 (2), p.e0146216-e0146216

2016

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Whole genome sequence analysis of Neisseria meningitidis strains circulating in Kazakhstan, 2017-2018

PloS one, 2022-12, Vol.17 (12), p.e0279536-e0279536

2022

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Bacillus anthracis in South Africa, 1975–2013: are some lineages vanishing?

BMC genomics, 2024-07, Vol.25 (1), p.1-10, Article 742

2024

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On-line resources for bacterial micro-evolution studies using MLVA or CRISPR typing

Biochimie, 2008-04, Vol.90 (4), p.660-668

2008

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Brucella inopinata sp. nov., isolated from a breast implant infection

International journal of systematic and evolutionary microbiology, 2010-04, Vol.60 (Pt 4), p.801-808

2010

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The susceptibility of Pseudomonas aeruginosa strains from cystic fibrosis patients to bacteriophages

PloS one, 2013-04, Vol.8 (4), p.e60575-e60575

2013

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Bacillus anthracis Phylogeography: New Clues From Kazakhstan, Central Asia

Frontiers in microbiology, 2021-12, Vol.12, p.778225-778225

2021

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Omp2b Porin Alteration in the Course of Evolution of Brucella spp

Frontiers in microbiology, 2020-02, Vol.11, p.284-284

2020

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Brucella spp. of amphibians comprise genomically diverse motile strains competent for replication in macrophages and survival in mammalian hosts

Scientific reports, 2017-03, Vol.7 (1), p.44420-44420, Article 44420

2017

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Investigation of a Large Collection of Pseudomonas aeruginosa Bacteriophages Collected from a Single Environmental Source in Abidjan, Côte d'Ivoire

PloS one, 2015-06, Vol.10 (6), p.e0130548

2015

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Genetic diversity of Francisella tularensis subsp. holarctica in Kazakhstan

PLoS neglected tropical diseases, 2021-05, Vol.15 (5), p.e0009419-e0009419

2021

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Identification of Variable-Number Tandem-Repeat (VNTR) Sequences in Acinetobacter baumannii and Interlaboratory Validation of an Optimized Multiple-Locus VNTR Analysis Typing Scheme

Journal of Clinical Microbiology, 2011-02, Vol.49 (2), p.539-548

2011

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Brucella abortus in Kazakhstan, population structure and comparison with worldwide genetic diversity

Frontiers in microbiology, 2023-03, Vol.14, p.1106994-1106994

2023

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Genetic Homogeneity of Francisella tularensis subsp. mediasiatica Strains in Kazakhstan

Pathogens (Basel), 2024-07, Vol.13 (7), p.581

2024

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Large Preferred Region for Packaging of Bacterial DNA by phiC725A, a Novel Pseudomonas aeruginosa F116-Like Bacteriophage

PloS one, 2017-01, Vol.12 (1), p.e0169684-e0169684

2017

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Progenitor “Mycobacterium canettii” clone responsible for lymph node tuberculosis epidemic, Djibouti

Emerging infectious diseases, 2014-01, Vol.20 (1), p.21-28

2014

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Evaluation of Brucella MLVA typing for human brucellosis

Journal of microbiological methods, 2007-04, Vol.69 (1), p.137-145

2007

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Identification of polymorphic tandem repeats by direct comparison of genome sequence from different bacterial strains: a web-based resource

BMC bioinformatics, 2004-01, Vol.5 (1), p.4-4, Article 4

2004

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Characterization of sixteen Achromobacter xylosoxidans phages from Abidjan, Côte d’Ivoire, isolated on a single clinical strain

Archives of virology, 2020-03, Vol.165 (3), p.725-730

2020

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The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats

CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins

CRISPRCasdb a successor of CRISPRdb containing CRISPR arrays and cas genes from complete genome sequences, and tools to download and query lists of repeats and spacers

Investigation of Pseudomonas aeruginosa strain PcyII-10 variants resisting infection by N4-like phage Ab09 in search for genes involved in phage adsorption

Genomic Diversity and Zoonotic Potential of Brucella neotomae

Genotypic Expansion Within the Population Structure of Classical Brucella Species Revealed by MLVA16 Typing of 1404 Brucella Isolates From Different Animal and Geographic Origins, 1974-2006

Comparison of French and Worldwide Bacillus anthracis Strains Favors a Recent, Post-Columbian Origin of the Predominant North-American Clade

Whole genome sequence analysis of Neisseria meningitidis strains circulating in Kazakhstan, 2017-2018

Bacillus anthracis in South Africa, 1975–2013: are some lineages vanishing?

On-line resources for bacterial micro-evolution studies using MLVA or CRISPR typing

Brucella inopinata sp. nov., isolated from a breast implant infection

The susceptibility of Pseudomonas aeruginosa strains from cystic fibrosis patients to bacteriophages

Bacillus anthracis Phylogeography: New Clues From Kazakhstan, Central Asia

Omp2b Porin Alteration in the Course of Evolution of Brucella spp

Brucella spp. of amphibians comprise genomically diverse motile strains competent for replication in macrophages and survival in mammalian hosts

Investigation of a Large Collection of Pseudomonas aeruginosa Bacteriophages Collected from a Single Environmental Source in Abidjan, Côte d'Ivoire

Genetic diversity of Francisella tularensis subsp. holarctica in Kazakhstan

Identification of Variable-Number Tandem-Repeat (VNTR) Sequences in Acinetobacter baumannii and Interlaboratory Validation of an Optimized Multiple-Locus VNTR Analysis Typing Scheme

Brucella abortus in Kazakhstan, population structure and comparison with worldwide genetic diversity

Genetic Homogeneity of Francisella tularensis subsp. mediasiatica Strains in Kazakhstan

Large Preferred Region for Packaging of Bacterial DNA by phiC725A, a Novel Pseudomonas aeruginosa F116-Like Bacteriophage

Progenitor “Mycobacterium canettii” clone responsible for lymph node tuberculosis epidemic, Djibouti

Evaluation of Brucella MLVA typing for human brucellosis

Identification of polymorphic tandem repeats by direct comparison of genome sequence from different bacterial strains: a web-based resource

Characterization of sixteen Achromobacter xylosoxidans phages from Abidjan, Côte d’Ivoire, isolated on a single clinical strain

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