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Mosaic deletion patterns of the human antibody heavy chain gene locus shown by Bayesian haplotyping

Nature communications, 2019-02, Vol.10 (1), p.628-14, Article 628

2019

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Hierarchical Clustering Can Identify B Cell Clones with High Confidence in Ig Repertoire Sequencing Data

The Journal of immunology (1950), 2017-03, Vol.198 (6), p.2489-2499

2017

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pRESTO: a toolkit for processing high-throughput sequencing raw reads of lymphocyte receptor repertoires

Bioinformatics (Oxford, England), 2014-07, Vol.30 (13), p.1930-1932

2014

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Dysregulation of B Cell Repertoire Formation in Myasthenia Gravis Patients Revealed through Deep Sequencing

The Journal of immunology (1950), 2017-02, Vol.198 (4), p.1460-1473

2017

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Systematic identification of edited microRNAs in the human brain

Genome research, 2012-08, Vol.22 (8), p.1533-1540

2012

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Single T Cell Sequencing Demonstrates the Functional Role of αβ TCR Pairing in Cell Lineage and Antigen Specificity

Frontiers in immunology, 2019-07, Vol.10, p.1516-1516

2019

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High-resolution antibody dynamics of vaccine-induced immune responses

Proceedings of the National Academy of Sciences - PNAS, 2014-04, Vol.111 (13), p.4928-4933

2014

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Models of somatic hypermutation targeting and substitution based on synonymous mutations from high-throughput immunoglobulin sequencing data

Frontiers in immunology, 2013, Vol.4, p.358-358

2013

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Breast cancer is marked by specific, Public T-cell receptor CDR3 regions shared by mice and humans

PLoS computational biology, 2021-01, Vol.17 (1), p.e1008486-e1008486

2021

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Barcoding bias in high-throughput multiplex sequencing of miRNA

Genome research, 2011-09, Vol.21 (9), p.1506-1511

2011

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Antibody Repertoire Analysis of Hepatitis C Virus Infections Identifies Immune Signatures Associated With Spontaneous Clearance

Frontiers in immunology, 2018-12, Vol.9, p.3004-3004

2018

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Exploration of immunoglobulin transcriptomes from mice immunized with three-finger toxins and phospholipases A2 from the Central American coral snake, Micrurus nigrocinctus

PeerJ (San Francisco, CA), 2017-01, Vol.5, p.e2924-e2924

2017

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Transcriptional Profiling of CD4 T Cells Identifies Distinct Subgroups of HIV-1 Elite Controllers

Journal of Virology, 2011-03, Vol.85 (6), p.3015-3019

2011

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Efficient microRNA capture and bar-coding via enzymatic oligonucleotide adenylation

Nature methods, 2008-09, Vol.5 (9), p.777-779

2008

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Laminin reduces expression of the human α6 integrin subunit gene by altering the level of the transcription factors Sp1 and Sp3

Investigative ophthalmology & visual science, 2007-08, Vol.48 (8), p.3490-3505

2007

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Liver Is a Generative Site for the B Cell Response to Ehrlichia muris

Immunity (Cambridge, Mass.), 2019-12, Vol.51 (6), p.1088-1101.e5

2019

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Massively parallel sequencing of single cells by epicPCR links functional genes with phylogenetic markers

The ISME Journal, 2016-02, Vol.10 (2), p.427-436

2016

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Salmonella Infection Drives Promiscuous B Cell Activation Followed by Extrafollicular Affinity Maturation

Immunity (Cambridge, Mass.), 2015-07, Vol.43 (1), p.120-131

2015

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Transcriptional regulation of the cyclin-dependent kinase inhibitor 1A (p21) gene by NFI in proliferating human cells

Nucleic acids research, 2006-12, Vol.34 (22), p.6472-6487

2006

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A Model of Somatic Hypermutation Targeting in Mice Based on High-Throughput Ig Sequencing Data

The Journal of immunology (1950), 2016-11, Vol.197 (9), p.3566-3574

2016

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Altered expression of the poly(ADP-ribosyl)ation enzymes in uveal melanoma and regulation of PARG gene expression by the transcription factor ERM

Investigative ophthalmology & visual science, 2012-09, Vol.53 (10), p.6219-6231

2012

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Reprogramming of T Cells from Human Peripheral Blood

Cell stem cell, 2010-07, Vol.7 (1), p.15-19

2010

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In Cellulo DNA Analysis: LMPCR Footprinting

Methods in molecular biology (Clifton, N.J.), 2015-01, Vol.1334, p.41

2015

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Abstract 1541: Directed, unbiased mapping of lentiviral integrations with next generation sequencing in CAR-T cells

Cancer research (Chicago, Ill.), 2018-07, Vol.78 (13_Supplement), p.1541-1541

2018

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Mosaic deletion patterns of the human antibody heavy chain gene locus shown by Bayesian haplotyping

Hierarchical Clustering Can Identify B Cell Clones with High Confidence in Ig Repertoire Sequencing Data

pRESTO: a toolkit for processing high-throughput sequencing raw reads of lymphocyte receptor repertoires

Dysregulation of B Cell Repertoire Formation in Myasthenia Gravis Patients Revealed through Deep Sequencing

Systematic identification of edited microRNAs in the human brain

Single T Cell Sequencing Demonstrates the Functional Role of αβ TCR Pairing in Cell Lineage and Antigen Specificity

High-resolution antibody dynamics of vaccine-induced immune responses

Models of somatic hypermutation targeting and substitution based on synonymous mutations from high-throughput immunoglobulin sequencing data

Breast cancer is marked by specific, Public T-cell receptor CDR3 regions shared by mice and humans

Barcoding bias in high-throughput multiplex sequencing of miRNA

Antibody Repertoire Analysis of Hepatitis C Virus Infections Identifies Immune Signatures Associated With Spontaneous Clearance

Exploration of immunoglobulin transcriptomes from mice immunized with three-finger toxins and phospholipases A2 from the Central American coral snake, Micrurus nigrocinctus

Transcriptional Profiling of CD4 T Cells Identifies Distinct Subgroups of HIV-1 Elite Controllers

Efficient microRNA capture and bar-coding via enzymatic oligonucleotide adenylation

Laminin reduces expression of the human α6 integrin subunit gene by altering the level of the transcription factors Sp1 and Sp3

Correction: The Effects of Somatic Hypermutation on Neutralization and Binding in the PGT121 Family of Broadly Neutralizing HIV Antibodies

Liver Is a Generative Site for the B Cell Response to Ehrlichia muris

Massively parallel sequencing of single cells by epicPCR links functional genes with phylogenetic markers

Salmonella Infection Drives Promiscuous B Cell Activation Followed by Extrafollicular Affinity Maturation

Transcriptional regulation of the cyclin-dependent kinase inhibitor 1A (p21) gene by NFI in proliferating human cells

A Model of Somatic Hypermutation Targeting in Mice Based on High-Throughput Ig Sequencing Data

Altered expression of the poly(ADP-ribosyl)ation enzymes in uveal melanoma and regulation of PARG gene expression by the transcription factor ERM

Reprogramming of T Cells from Human Peripheral Blood

In Cellulo DNA Analysis: LMPCR Footprinting

Abstract 1541: Directed, unbiased mapping of lentiviral integrations with next generation sequencing in CAR-T cells

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