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Whole-genome sequencing to control antimicrobial resistance

Trends in genetics, 2014-09, Vol.30 (9), p.401-407

2014

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A prospective bacterial whole-genome-sequencing-based surveillance programme for comprehensive early detection of healthcare-associated infection transmission in paediatric oncology patients

The Journal of hospital infection, 2024-01, Vol.143, p.53-63

2024

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Comprehensive pan-genomic, resistome and virulome analysis of clinical OXA-48 producing carbapenem-resistant Serratia marcescens strains

Gene, 2022-05, Vol.822, p.146355-146355, Article 146355

2022

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Yersinia pestis strains isolated in natural plague foci of Caucasus and Transcaucasia in the context of the global evolution of species

Genomics (San Diego, Calif.), 2021-07, Vol.113 (4), p.1952-1961

2021

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Comparative genomics in infectious disease

Current opinion in microbiology, 2020-02, Vol.53, p.61-70

2020

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After the deluge: mining Staphylococcus aureus genomic data for clinical associations and host–pathogen interactions

Current opinion in microbiology, 2018-02, Vol.41, p.43-50

2018

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Investigation of the virulence and genomics of Aeromonas salmonicida strains isolated from human patients

Infection, genetics and evolution, 2019-03, Vol.68, p.1-9

2019

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Genomic characterization of endemic Salmonella enterica serovar Typhimurium and Salmonella enterica serovar I 4,[5],12:i:- isolated in Malaysia

Infection, genetics and evolution, 2018-08, Vol.62, p.109-121

2018

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Genomic epidemiological investigation of a Streptococcus suis outbreak in Guangxi, China, 2016

Infection, genetics and evolution, 2019-03, Vol.68, p.249-252

2019

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Public perceptions of bacterial whole-genome sequencing for tuberculosis

Trends in genetics, 2015-02, Vol.31 (2), p.58-60

2015

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Genomic epidemiology of methicillin-susceptible Staphylococcus aureus across colonisation and skin and soft tissue infection

The Journal of infection, 2017-10, Vol.75 (4), p.326-335

2017

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Comparative genomic analysis of two isolates of Vibrio cholerae O1 Ogawa El Tor isolated during outbreak in Mariupol in 2011

Infection, genetics and evolution, 2016-10, Vol.44, p.471-478

2016

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Avrilella dinanensis gen. nov., sp. nov., a novel bacterium of the family Flavobacteriaceae isolated from human blood

Systematic and applied microbiology, 2020-09, Vol.43 (5), p.126124-126124, Article 126124

2020

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Phylogeny and antimicrobial resistance in Neisseria gonorrhoeae isolates from Rio de Janeiro, Brazil

Infection, genetics and evolution, 2018-03, Vol.58, p.157-163

2018

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Current topics of molecular mycobacteriology

Infection, genetics and evolution, 2019-09, Vol.73, p.132-138

Mokrousov, Igor

2019

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Simultaneous emergence and rapid spread of three OXA-23 producing Acinetobacter baumannii ST208 strains in intensive care units confirmed by whole genome sequencing

Infection, genetics and evolution, 2018-03, Vol.58, p.243-250

2018

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Identification of Shiga toxin-producing (STEC) and enteropathogenic (EPEC) Escherichia coli in diarrhoeic calves and comparative genomics of O5 bovine and human STEC

Veterinary microbiology, 2017-04, Vol.202, p.16-22

2017

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A full genomic characterization of the development of a stable Small Colony Variant cell-type by a clinical Staphylococcus aureus strain

Infection, genetics and evolution, 2015-12, Vol.36, p.345-355

2015

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Outbreak of vanB vancomycin-resistant Enterococcus faecium colonization in a neonatal service

American journal of infection control, 2015-10, Vol.43 (10), p.1061-1065

2015

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Challenges of Francisella classification exemplified by an atypical clinical isolate

Diagnostic microbiology and infectious disease, 2018-04, Vol.90 (4), p.241-247

2018

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Comparative genomic and phylogenetic analysis of a toxigenic clinical isolate of Corynebacterium diphtheriae strain B-D-16-78 from Malaysia

Infection, genetics and evolution, 2017-10, Vol.54, p.263-270

2017

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Whole-genome sequencing identification of a multidrug-resistant Salmonella enterica serovar Typhimurium strain carrying bla NDM-5 from Guangdong, China

Infection, genetics and evolution, 2017-11, Vol.55, p.195-198

2017

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Whole genome sequence typing and microarray profiling of nasal and blood stream methicillin-resistant Staphylococcus aureus isolates: Clues to phylogeny and invasiveness

Infection, genetics and evolution, 2015-12, Vol.36, p.475-482

2015

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Whole-genome sequencing to control antimicrobial resistance

A prospective bacterial whole-genome-sequencing-based surveillance programme for comprehensive early detection of healthcare-associated infection transmission in paediatric oncology patients

Comprehensive pan-genomic, resistome and virulome analysis of clinical OXA-48 producing carbapenem-resistant Serratia marcescens strains

Yersinia pestis strains isolated in natural plague foci of Caucasus and Transcaucasia in the context of the global evolution of species

Comparative genomics in infectious disease

After the deluge: mining Staphylococcus aureus genomic data for clinical associations and host–pathogen interactions

Investigation of the virulence and genomics of Aeromonas salmonicida strains isolated from human patients

Genomic characterization of endemic Salmonella enterica serovar Typhimurium and Salmonella enterica serovar I 4,[5],12:i:- isolated in Malaysia

Genomic epidemiological investigation of a Streptococcus suis outbreak in Guangxi, China, 2016

Public perceptions of bacterial whole-genome sequencing for tuberculosis

Genomic epidemiology of methicillin-susceptible Staphylococcus aureus across colonisation and skin and soft tissue infection

Comparative genomic analysis of two isolates of Vibrio cholerae O1 Ogawa El Tor isolated during outbreak in Mariupol in 2011

Avrilella dinanensis gen. nov., sp. nov., a novel bacterium of the family Flavobacteriaceae isolated from human blood

Phylogeny and antimicrobial resistance in Neisseria gonorrhoeae isolates from Rio de Janeiro, Brazil

Current topics of molecular mycobacteriology

Simultaneous emergence and rapid spread of three OXA-23 producing Acinetobacter baumannii ST208 strains in intensive care units confirmed by whole genome sequencing

Identification of Shiga toxin-producing (STEC) and enteropathogenic (EPEC) Escherichia coli in diarrhoeic calves and comparative genomics of O5 bovine and human STEC

A full genomic characterization of the development of a stable Small Colony Variant cell-type by a clinical Staphylococcus aureus strain

Outbreak of vanB vancomycin-resistant Enterococcus faecium colonization in a neonatal service

Challenges of Francisella classification exemplified by an atypical clinical isolate

Comparative genomic and phylogenetic analysis of a toxigenic clinical isolate of Corynebacterium diphtheriae strain B-D-16-78 from Malaysia

Whole-genome sequencing identification of a multidrug-resistant Salmonella enterica serovar Typhimurium strain carrying bla NDM-5 from Guangdong, China

Whole genome sequence typing and microarray profiling of nasal and blood stream methicillin-resistant Staphylococcus aureus isolates: Clues to phylogeny and invasiveness

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