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vSNP: a SNP pipeline for the generation of transparent SNP matrices and phylogenetic trees from whole genome sequencing data sets

BMC genomics, 2024-06, Vol.25 (1), p.545-14, Article 545

2024

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Comprehensive genomic analysis of the SARS-CoV-2 Omicron variant BA.2.76 in Jining City, China, 2022

BMC genomics, 2024-04, Vol.25 (1), p.378-378, Article 378

2024

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Genomic characterization and probiotic potential assessment of an exopolysaccharide-producing strain Pediococcus pentosaceus LL-07 isolated from fermented meat

BMC microbiology, 2024-04, Vol.24 (1), p.142-142, Article 142

2024

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ACMGA: a reference-free multiple-genome alignment pipeline for plant species

BMC genomics, 2024-05, Vol.25 (1), p.515-515, Article 515

2024

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Genome-wide analysis reveals genomic diversity and signatures of selection in Qinchuan beef cattle

BMC genomics, 2024-06, Vol.25 (1), p.1-558, Article 558

2024

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Insights into the novel Enterococcus faecalis phage: A comprehensive genome analysis

PloS one, 2024-05, Vol.19 (5), p.e0301292-e0301292

2024

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Aspergillus flavus pangenome (AflaPan) uncovers novel aflatoxin and secondary metabolite associated gene clusters

BMC plant biology, 2024-05, Vol.24 (1), p.354-354, Article 354

2024

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Limited Added Diagnostic Value of Whole Genome Sequencing in Genetic Testing of Inherited Retinal Diseases in a Swiss Patient Cohort

International journal of molecular sciences, 2024-06, Vol.25 (12), p.6540

2024

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bsgenova: an accurate, robust, and fast genotype caller for bisulfite-sequencing data

BMC bioinformatics, 2024-06, Vol.25 (1), p.1-12, Article 206

2024

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Identification of novel single nucleotide variants in the drug resistance mechanism of Mycobacterium tuberculosis isolates by whole-genome analysis

BMC genomics, 2024-05, Vol.25 (1), p.478-478, Article 478

2024

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Epidemiology and genetic diversity of Burkholderia pseudomallei from Riau Province, Indonesia

PLoS neglected tropical diseases, 2024-05, Vol.18 (5), p.e0012195

2024

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Emergence of Eurasian Avian-Like Swine Influenza A (H1N1) virus in a child in Shandong Province, China

BMC infectious diseases, 2024-06, Vol.24 (1), p.550-9, Article 550

2024

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Evaluation of fortimicin antibiotic combinations against MDR Pseudomonas aeruginosa and resistome analysis of a whole genome sequenced pan-drug resistant isolate

BMC microbiology, 2024-05, Vol.24 (1), p.164-164, Article 164

2024

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Molecular basis of the persistence of chloramphenicol resistance among Escherichia coli and Salmonella spp. from pigs, pork and humans in Thailand

PloS one, 2024-05, Vol.19 (5), p.e0304250-e0304250

2024

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Performance of amplicon and capture based next-generation sequencing approaches for the epidemiological surveillance of Omicron SARS-CoV-2 and other variants of concern

PloS one, 2024-04, Vol.19 (4), p.e0289188-e0289188

2024

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The Carthamus tinctorius L. genome sequence provides insights into synthesis of unsaturated fatty acids

BMC genomics, 2024-05, Vol.25 (1), p.510-510, Article 510

2024

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Comprehensive multiomics analysis reveals distinct differences between pediatric choroid plexus papilloma and carcinoma

Acta neuropathologica communications, 2024-06, Vol.12 (1), p.93-15, Article 93

2024

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Whole-Genome Sequencing and Genetic Diversity of Human Respiratory Syncytial Virus in Patients with Influenza-like Illness in Sicily (Italy) from 2017 to 2023

Viruses, 2024-05, Vol.16 (6), p.851

2024

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Copy number variation and elevated genetic diversity at immune trait loci in Atlantic and Pacific herring

BMC genomics, 2024-05, Vol.25 (1), p.459-459, Article 459

2024

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Genomic investigation of Salmonella enterica Serovar Welikade from a pediatric diarrhea case first time in Shanghai, China

BMC genomics, 2024-06, Vol.25 (1), p.604-10, Article 604

2024

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A solution to achieve sequencing from SARS-CoV-2 specimens with low viral loads: concatenation of reads from independent reactions

Virology journal, 2024-05, Vol.21 (1), p.121-121, Article 121

2024

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Genomic analysis of multidrug-resistant Escherichia coli from Urban Environmental water sources in Accra, Ghana, Provides Insights into public health implications

PloS one, 2024-05, Vol.19 (5), p.e0301531-e0301531

2024

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National genomic epidemiology investigation revealed the spread of carbapenem-resistant Escherichia coli in healthy populations and the impact on public health

Genome medicine, 2024-04, Vol.16 (1), p.57-57, Article 57

2024

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Elucidating the Role of OXPHOS Variants in Asthenozoospermia: Insights from Whole Genome Sequencing and an In Silico Analysis

International journal of molecular sciences, 2024-04, Vol.25 (7), p.4121

2024

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Emergence and genomic chion of Proteus mirabilis harboring blaNDM-1 in Korean companion dogs

Veterinary research (Paris), 2024-04, Vol.55 (1), p.1-50

2024

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vSNP: a SNP pipeline for the generation of transparent SNP matrices and phylogenetic trees from whole genome sequencing data sets

Comprehensive genomic analysis of the SARS-CoV-2 Omicron variant BA.2.76 in Jining City, China, 2022

Genomic characterization and probiotic potential assessment of an exopolysaccharide-producing strain Pediococcus pentosaceus LL-07 isolated from fermented meat

ACMGA: a reference-free multiple-genome alignment pipeline for plant species

Genome-wide analysis reveals genomic diversity and signatures of selection in Qinchuan beef cattle

Insights into the novel Enterococcus faecalis phage: A comprehensive genome analysis

Aspergillus flavus pangenome (AflaPan) uncovers novel aflatoxin and secondary metabolite associated gene clusters

Limited Added Diagnostic Value of Whole Genome Sequencing in Genetic Testing of Inherited Retinal Diseases in a Swiss Patient Cohort

bsgenova: an accurate, robust, and fast genotype caller for bisulfite-sequencing data

Identification of novel single nucleotide variants in the drug resistance mechanism of Mycobacterium tuberculosis isolates by whole-genome analysis

Epidemiology and genetic diversity of Burkholderia pseudomallei from Riau Province, Indonesia

Emergence of Eurasian Avian-Like Swine Influenza A (H1N1) virus in a child in Shandong Province, China

Evaluation of fortimicin antibiotic combinations against MDR Pseudomonas aeruginosa and resistome analysis of a whole genome sequenced pan-drug resistant isolate

Molecular basis of the persistence of chloramphenicol resistance among Escherichia coli and Salmonella spp. from pigs, pork and humans in Thailand

Performance of amplicon and capture based next-generation sequencing approaches for the epidemiological surveillance of Omicron SARS-CoV-2 and other variants of concern

The Carthamus tinctorius L. genome sequence provides insights into synthesis of unsaturated fatty acids

Comprehensive multiomics analysis reveals distinct differences between pediatric choroid plexus papilloma and carcinoma

Whole-Genome Sequencing and Genetic Diversity of Human Respiratory Syncytial Virus in Patients with Influenza-like Illness in Sicily (Italy) from 2017 to 2023

Copy number variation and elevated genetic diversity at immune trait loci in Atlantic and Pacific herring

Genomic investigation of Salmonella enterica Serovar Welikade from a pediatric diarrhea case first time in Shanghai, China

A solution to achieve sequencing from SARS-CoV-2 specimens with low viral loads: concatenation of reads from independent reactions

Genomic analysis of multidrug-resistant Escherichia coli from Urban Environmental water sources in Accra, Ghana, Provides Insights into public health implications

National genomic epidemiology investigation revealed the spread of carbapenem-resistant Escherichia coli in healthy populations and the impact on public health

Elucidating the Role of OXPHOS Variants in Asthenozoospermia: Insights from Whole Genome Sequencing and an In Silico Analysis

Emergence and genomic chion of Proteus mirabilis harboring blaNDM-1 in Korean companion dogs

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