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HiGlass: web-based visual exploration and analysis of genome interaction maps

Genome Biology, 2018-08, Vol.19 (1), p.125-125, Article 125

2018

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Comprehensive gene and pathway analysis of cervical cancer progression

Oncology letters, 2020-04, Vol.19 (4), p.3316-3332

2020

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spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data

BMC genomics, 2022-06, Vol.23 (1), p.434-434, Article 434

2022

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Comparative transcriptome profiling of virulent and non-virulent Trypanosoma cruzi underlines the role of surface proteins during infection

PLoS pathogens, 2017-12, Vol.13 (12), p.e1006767-e1006767

2017

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The cohesin loader SCC2 contains a PHD finger that is required for meiosis in land plants

PLoS genetics, 2020-06, Vol.16 (6), p.e1008849

2020

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Lipid transfer from plants to arbuscular mycorrhiza fungi

eLife, 2017-07, Vol.6

2017

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Mustache: multi-scale detection of chromatin loops from Hi-C and Micro-C maps using scale-space representation

Genome Biology, 2020-09, Vol.21 (1), p.256-256, Article 256

2020

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FAN-C: a feature-rich framework for the analysis and visualisation of chromosome conformation capture data

Genome Biology, 2020-12, Vol.21 (1), p.303-303, Article 303

2020

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Selective sweeps on novel and introgressed variation shape mimicry loci in a butterfly adaptive radiation

PLoS biology, 2020-02, Vol.18 (2), p.e3000597-e3000597

2020

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Genetic and functional diversification of chemosensory pathway receptors in mosquito-borne filarial nematodes

PLoS biology, 2020-06, Vol.18 (6), p.e3000723

2020

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Population genomics shows no distinction between pathogenic Candida krusei and environmental Pichia kudriavzevii: One species, four names

PLoS pathogens, 2018-07, Vol.14 (7), p.e1007138-e1007138

2018

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Fruit weight is controlled by Cell Size Regulator encoding a novel protein that is expressed in maturing tomato fruits

PLoS genetics, 2017-08, Vol.13 (8), p.e1006930-e1006930

2017

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METABOLIC: high-throughput profiling of microbial genomes for functional traits, metabolism, biogeochemistry, and community-scale functional networks

Microbiome, 2022-02, Vol.10 (1), p.33-22, Article 33

2022

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GeNets: a unified web platform for network-based genomic analyses

Nature methods, 2018-07, Vol.15 (7), p.543

2018

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Identification of core genes and outcomes in hepatocellular carcinoma by bioinformatics analysis

Journal of cellular biochemistry, 2019-06, Vol.120 (6), p.10069-10081

2019

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Skp, Cullin, F-box (SCF)-Met30 and SCF-Cdc4-Mediated Proteolysis of CENP-A Prevents Mislocalization of CENP-A for Chromosomal Stability in Budding Yeast

PLoS genetics, 2020-02, Vol.16 (2), p.e1008597-e1008597

2020

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Integration of single-cell RNA-seq data into population models to characterize cancer metabolism

PLoS computational biology, 2019-02, Vol.15 (2), p.e1006733

2019

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PSMD2 regulates breast cancer cell proliferation and cell cycle progression by modulating p21 and p27 proteasomal degradation

Cancer letters, 2018-08, Vol.430, p.109-122

2018

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High-throughput mapping of the phage resistance landscape in E. coli

PLoS biology, 2020-10, Vol.18 (10), p.e3000877

2020

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A quantitative comparison of single-cell whole genome amplification methods

PloS one, 2014-08, Vol.9 (8), p.e105585-e105585

2014

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Resveratrol inhibits the progression of cervical cancer by suppressing the transcription and expression of HPV E6 and E7 genes

International journal of molecular medicine, 2021-01, Vol.47 (1), p.335-345

2021

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Why the estrous cycle matters for neuroscience

Biology of sex differences, 2022-10, Vol.13 (1), p.1-62, Article 62

2022

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The effects of manipulating levels of replication initiation factors on origin firing efficiency in yeast

PLoS genetics, 2019-10, Vol.15 (10), p.e1008430

2019

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Single-cell copy number variant detection reveals the dynamics and diversity of adaptation

PLoS biology, 2018-12, Vol.16 (12), p.e3000069

2018

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Hepatozoon (Eucoccidiorida: Hepatozoidae) in wild mammals of the Americas: a systematic review

Parasites & vectors, 2024-03, Vol.17 (1), p.108-108, Article 108

2024

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HiGlass: web-based visual exploration and analysis of genome interaction maps

Comprehensive gene and pathway analysis of cervical cancer progression

spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data

Comparative transcriptome profiling of virulent and non-virulent Trypanosoma cruzi underlines the role of surface proteins during infection

The cohesin loader SCC2 contains a PHD finger that is required for meiosis in land plants

Lipid transfer from plants to arbuscular mycorrhiza fungi

Mustache: multi-scale detection of chromatin loops from Hi-C and Micro-C maps using scale-space representation

FAN-C: a feature-rich framework for the analysis and visualisation of chromosome conformation capture data

Selective sweeps on novel and introgressed variation shape mimicry loci in a butterfly adaptive radiation

Genetic and functional diversification of chemosensory pathway receptors in mosquito-borne filarial nematodes

Population genomics shows no distinction between pathogenic Candida krusei and environmental Pichia kudriavzevii: One species, four names

Fruit weight is controlled by Cell Size Regulator encoding a novel protein that is expressed in maturing tomato fruits

METABOLIC: high-throughput profiling of microbial genomes for functional traits, metabolism, biogeochemistry, and community-scale functional networks

GeNets: a unified web platform for network-based genomic analyses

Identification of core genes and outcomes in hepatocellular carcinoma by bioinformatics analysis

Skp, Cullin, F-box (SCF)-Met30 and SCF-Cdc4-Mediated Proteolysis of CENP-A Prevents Mislocalization of CENP-A for Chromosomal Stability in Budding Yeast

Integration of single-cell RNA-seq data into population models to characterize cancer metabolism

PSMD2 regulates breast cancer cell proliferation and cell cycle progression by modulating p21 and p27 proteasomal degradation

High-throughput mapping of the phage resistance landscape in E. coli

A quantitative comparison of single-cell whole genome amplification methods

Resveratrol inhibits the progression of cervical cancer by suppressing the transcription and expression of HPV E6 and E7 genes

Why the estrous cycle matters for neuroscience

The effects of manipulating levels of replication initiation factors on origin firing efficiency in yeast

Single-cell copy number variant detection reveals the dynamics and diversity of adaptation

Hepatozoon (Eucoccidiorida: Hepatozoidae) in wild mammals of the Americas: a systematic review

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