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progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement

PloS one, 2010-06, Vol.5 (6), p.e11147-e11147

2010

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Analysis of the Lactobacillus casei supragenome and its influence in species evolution and lifestyle adaptation

BMC genomics, 2012-10, Vol.13 (1), p.533-533

2012

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Reordering contigs of draft genomes using the Mauve Aligner

Bioinformatics, 2009-08, Vol.25 (16), p.2071-2073

2009

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Sepsis and Hemocyte Loss in Honey Bees (Apis mellifera) Infected with Serratia marcescens Strain Sicaria

PloS one, 2016-12, Vol.11 (12), p.e0167752-e0167752

2016

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Host range and molecular phylogenies of the soft rot enterobacterial genera Pectobacterium and Dickeya

Phytopathology, 2007-09, Vol.97 (9), p.1150-1163

2007

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Tailoring a Global Iron Regulon to a Uropathogen

mBio, 2020-03, Vol.11 (2)

2020

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Phylogeny and Virulence of Naturally Occurring Type III Secretion System-Deficient Pectobacterium Strains

Applied and Environmental Microbiology, 2009-07, Vol.75 (13), p.4539-4549

2009

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Evolution of extreme resistance to ionizing radiation via genetic adaptation of DNA repair

eLife, 2014-03, Vol.3, p.e01322-e01322

2014

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Evolution of the metabolic and regulatory networks associated with oxygen availability in two phytopathogenic enterobacteria

BMC genomics, 2012-03, Vol.13 (1), p.110-110, Article 110

2012

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Transcriptome changes associated with anaerobic growth in Yersinia intermedia (ATCC29909)

PloS one, 2013-10, Vol.8 (10), p.e76567

2013

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Mauve: multiple alignment of conserved genomic sequence with rearrangements

Genome research, 2004-07, Vol.14 (7), p.1394-1403

2004

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Genomic Variability of O Islands Encoding Tellurite Resistance in Enterohemorrhagic Escherichia coli O157:H7 Isolates

Journal of Bacteriology, 2002-09, Vol.184 (17), p.4690-4698

2002

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Genome-wide identification of plant-upregulated genes of Erwinia chrysanthemi 3937 using a GFP-based IVET leaf array

Molecular plant-microbe interactions, 2004-09, Vol.17 (9), p.999-1008

2004

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Text-mining of PubMed abstracts by natural language processing to create a public knowledge base on molecular mechanisms of bacterial enteropathogens

BMC bioinformatics, 2009-06, Vol.10 (1), p.177-177, Article 177

2009

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Gene Ontology annotation highlights shared and divergent pathogenic strategies of type III effector proteins deployed by the plant pathogen Pseudomonas syringae pv tomato DC3000 and animal pathogenic Escherichia coli strains

BMC microbiology, 2009-02, Vol.9 Suppl 1 (S1), p.S4-S4, Article S4

2009

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hrp genes of Erwinia chrysanthemi 3937 are important virulence factors

Molecular plant-microbe interactions, 2002-05, Vol.15 (5), p.472-480

2002

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The Enterobacterium Trabulsiella odontotermitis Presents Novel Adaptations Related to Its Association with Fungus-Growing Termites

Applied and Environmental Microbiology, 2015-10, Vol.81 (19), p.6577-6588

2015

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Escherichia coli K-12: a cooperatively developed annotation snapshot--2005

Nucleic acids research, 2006-01, Vol.34 (1), p.1-9

2006

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Using Comparative Genomics for Inquiry-Based Learning to Dissect Virulence of Escherichia coli O157:H7 and Yersinia pestis

CBE life sciences education, 2012-03, Vol.11 (1), p.81-93

2012

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Strains of Escherichia coli O157:H7 Differ Primarily by Insertions or Deletions, Not Single-Nucleotide Polymorphisms

Journal of Bacteriology, 2002-04, Vol.184 (7), p.1873-1879

2002

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Microarray profiling of Erwinia chrysanthemi 3937 genes that are regulated during plant infection

Molecular plant-microbe interactions, 2002-07, Vol.15 (7), p.619-629

2002

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Identification of host-microbe interaction factors in the genomes of soft rot-associated pathogens Dickeya dadantii 3937 and Pectobacterium carotovorum WPP14 with supervised machine learning

BMC genomics, 2014-06, Vol.15 (1), p.508-508

2014

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Construction and characterization of an expressed sequenced tag library for the mosquito vector Armigeres subalbatus

BMC genomics, 2007-12, Vol.8 (1), p.462-462, Article 462

2007

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Insight into the transmission biology and species-specific functional capabilities of tsetse (Diptera: glossinidae) obligate symbiont Wigglesworthia

mBio, 2012-01, Vol.3 (1)

2012

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Genome sequence of enterohaemorrhagic Escherichia coli O157:H7

Nature (London), 2001-01, Vol.409 (6819), p.529-533

2001

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progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement

Analysis of the Lactobacillus casei supragenome and its influence in species evolution and lifestyle adaptation

Reordering contigs of draft genomes using the Mauve Aligner

Sepsis and Hemocyte Loss in Honey Bees (Apis mellifera) Infected with Serratia marcescens Strain Sicaria

Host range and molecular phylogenies of the soft rot enterobacterial genera Pectobacterium and Dickeya

Tailoring a Global Iron Regulon to a Uropathogen

Phylogeny and Virulence of Naturally Occurring Type III Secretion System-Deficient Pectobacterium Strains

Evolution of extreme resistance to ionizing radiation via genetic adaptation of DNA repair

Evolution of the metabolic and regulatory networks associated with oxygen availability in two phytopathogenic enterobacteria

Transcriptome changes associated with anaerobic growth in Yersinia intermedia (ATCC29909)

Mauve: multiple alignment of conserved genomic sequence with rearrangements

Genomic Variability of O Islands Encoding Tellurite Resistance in Enterohemorrhagic Escherichia coli O157:H7 Isolates

Genome-wide identification of plant-upregulated genes of Erwinia chrysanthemi 3937 using a GFP-based IVET leaf array

Text-mining of PubMed abstracts by natural language processing to create a public knowledge base on molecular mechanisms of bacterial enteropathogens

Gene Ontology annotation highlights shared and divergent pathogenic strategies of type III effector proteins deployed by the plant pathogen Pseudomonas syringae pv tomato DC3000 and animal pathogenic Escherichia coli strains

hrp genes of Erwinia chrysanthemi 3937 are important virulence factors

The Enterobacterium Trabulsiella odontotermitis Presents Novel Adaptations Related to Its Association with Fungus-Growing Termites

Escherichia coli K-12: a cooperatively developed annotation snapshot--2005

Using Comparative Genomics for Inquiry-Based Learning to Dissect Virulence of Escherichia coli O157:H7 and Yersinia pestis

Strains of Escherichia coli O157:H7 Differ Primarily by Insertions or Deletions, Not Single-Nucleotide Polymorphisms

Microarray profiling of Erwinia chrysanthemi 3937 genes that are regulated during plant infection

Identification of host-microbe interaction factors in the genomes of soft rot-associated pathogens Dickeya dadantii 3937 and Pectobacterium carotovorum WPP14 with supervised machine learning

Construction and characterization of an expressed sequenced tag library for the mosquito vector Armigeres subalbatus

Insight into the transmission biology and species-specific functional capabilities of tsetse (Diptera: glossinidae) obligate symbiont Wigglesworthia

Genome sequence of enterohaemorrhagic Escherichia coli O157:H7

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