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Reproducibility of biophysical in silico neuron states and spikes from event-based partial histories

PLoS computational biology, 2023-10, Vol.19 (10), p.e1011548-e1011548

2023

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NetPyNE, a tool for data-driven multiscale modeling of brain circuits

eLife, 2019-04, Vol.8

2019

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A pipeline for the retrieval and extraction of domain-specific information with application to COVID-19 immune signatures

BMC bioinformatics, 2023-07, Vol.24 (1), p.292-22, Article 292

2023

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Human Neocortical Neurosolver (HNN), a new software tool for interpreting the cellular and network origin of human MEG/EEG data

eLife, 2020-01, Vol.9

2020

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Calcium regulation of HCN channels supports persistent activity in a multiscale model of neocortex

Neuroscience, 2016-03, Vol.316, p.344-366

2016

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Modernizing the NEURON Simulator for Sustainability, Portability, and Performance

Frontiers in neuroinformatics, 2022-06, Vol.16, p.884046

2022

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Tutorial: using NEURON for neuromechanical simulations

Frontiers in computational neuroscience, 2023-07, Vol.17, p.1143323-1143323

2023

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Efficient Simulation of 3D Reaction-Diffusion in Models of Neurons and Networks

Frontiers in neuroinformatics, 2022-05, Vol.16, p.847108-847108

2022

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Editorial: Reproducibility and Rigour in Computational Neuroscience

Frontiers in neuroinformatics, 2020-05, Vol.14, p.23-23

2020

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PLD3 affects axonal spheroids and network defects in Alzheimer’s disease

Nature (London), 2022-12, Vol.612 (7939), p.328-337

2022

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3D-printer visualization of neuron models

Frontiers in neuroinformatics, 2015-06, Vol.9, p.18-18

2015

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Neuron Names: A Gene- and Property-Based Name Format, With Special Reference to Cortical Neurons

Frontiers in neuroanatomy, 2019-03, Vol.13, p.25-25

2019

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Using NEURON for Reaction-Diffusion Modeling of Extracellular Dynamics

Frontiers in neuroinformatics, 2018-07, Vol.12, p.41-41

2018

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Automating literature screening and curation with applications to computational neuroscience

Journal of the American Medical Informatics Association : JAMIA, 2024-06, Vol.31 (7), p.1463-1470

2024

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Identifying Game-Based Digital Biomarkers of Cognitive Risk for Adolescent Substance Misuse: Protocol for a Proof-of-Concept Study

JMIR research protocols, 2023-11, Vol.12, p.e46990-e46990

2023

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The antidiabetic drug metformin prevents and reverses neuropathic pain and spinal cord microglial activation in male but not female mice

Pharmacological research, 2019-01, Vol.139, p.1-16

2019

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Twenty years of ModelDB and beyond: building essential modeling tools for the future of neuroscience

Journal of Computational Neuroscience, 2017-02, Vol.42 (1), p.1-10

2017

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Reaction-diffusion in the NEURON simulator

Frontiers in neuroinformatics, 2013-01, Vol.7, p.28-28

2013

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Reproducibility in Computational Neuroscience Models and Simulations

IEEE transactions on biomedical engineering, 2016-10, Vol.63 (10), p.2021-2035

2016

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Ah receptor agonists as endocrine disruptors: antiestrogenic activity and mechanisms

Toxicology letters, 1998-12, Vol.102-103 (1-3), p.343-347

1998

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Indirect AMP-Activated Protein Kinase Activators Prevent Incision-Induced Hyperalgesia and Block Hyperalgesic Priming, Whereas Positive Allosteric Modulators Block Only Priming in Mice

The Journal of pharmacology and experimental therapeutics, 2019-10, Vol.371 (1), p.138-150

2019

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SUBCELLULAR TO TISSUE SCALE MODELING OF ISCHEMIA AND SPREADING DEPOLARIZATION

IBRO neuroscience reports, 2023-10, Vol.15, p.S792-S792

2023

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Simulation Neurotechnologies for Advancing Brain Research: Parallelizing Large Networks in NEURON

Neural computation, 2016-10, Vol.28 (10), p.2063-2090

2016

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Web-based smoking cessation intervention that transitions from inpatient to outpatient: study protocol for a randomized controlled trial

Trials, 2012-08, Vol.13 (1), p.123-123, Article 123

2012

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Reproducibility of biophysical in silico neuron states and spikes from event-based partial histories

Open Source Brain: A Collaborative Resource for Visualizing, Analyzing, Simulating, and Developing Standardized Models of Neurons and Circuits

NetPyNE, a tool for data-driven multiscale modeling of brain circuits

A pipeline for the retrieval and extraction of domain-specific information with application to COVID-19 immune signatures

Human Neocortical Neurosolver (HNN), a new software tool for interpreting the cellular and network origin of human MEG/EEG data

Calcium regulation of HCN channels supports persistent activity in a multiscale model of neocortex

Modernizing the NEURON Simulator for Sustainability, Portability, and Performance

Tutorial: using NEURON for neuromechanical simulations

Efficient Simulation of 3D Reaction-Diffusion in Models of Neurons and Networks

Editorial: Reproducibility and Rigour in Computational Neuroscience

PLD3 affects axonal spheroids and network defects in Alzheimer’s disease

3D-printer visualization of neuron models

Neuron Names: A Gene- and Property-Based Name Format, With Special Reference to Cortical Neurons

Using NEURON for Reaction-Diffusion Modeling of Extracellular Dynamics

Automating literature screening and curation with applications to computational neuroscience

Identifying Game-Based Digital Biomarkers of Cognitive Risk for Adolescent Substance Misuse: Protocol for a Proof-of-Concept Study

The antidiabetic drug metformin prevents and reverses neuropathic pain and spinal cord microglial activation in male but not female mice

Twenty years of ModelDB and beyond: building essential modeling tools for the future of neuroscience

Reaction-diffusion in the NEURON simulator

Reproducibility in Computational Neuroscience Models and Simulations

Ah receptor agonists as endocrine disruptors: antiestrogenic activity and mechanisms

Indirect AMP-Activated Protein Kinase Activators Prevent Incision-Induced Hyperalgesia and Block Hyperalgesic Priming, Whereas Positive Allosteric Modulators Block Only Priming in Mice

SUBCELLULAR TO TISSUE SCALE MODELING OF ISCHEMIA AND SPREADING DEPOLARIZATION

Simulation Neurotechnologies for Advancing Brain Research: Parallelizing Large Networks in NEURON

Web-based smoking cessation intervention that transitions from inpatient to outpatient: study protocol for a randomized controlled trial

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