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A comprehensive review of protein-centric predictors for biomolecular interactions: from proteins to nucleic acids and beyond

Briefings in bioinformatics, 2024-03, Vol.25 (3)

2024

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GNNGL-PPI: multi-category prediction of protein-protein interactions using graph neural networks based on global graphs and local subgraphs

BMC genomics, 2024-05, Vol.25 (1), p.406-406, Article 406

2024

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Protein features fusion using attributed network embedding for predicting protein-protein interaction

BMC genomics, 2024-05, Vol.25 (1), p.466-466, Article 466

2024

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A variational expectation-maximization framework for balanced multi-scale learning of protein and drug interactions

Nature communications, 2024-05, Vol.15 (1), p.4476-4476, Article 4476

2024

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Deciphering Staphylococcus aureus- host dynamics using dual activity-based protein profiling of ATP-interacting proteins

mSystems, 2024-05, Vol.9 (5), p.e0017924-e0017924

2024

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Multi-level bioinformatics resources support drug target discovery of protein–protein interactions

Drug discovery today, 2024-05, Vol.29 (5), p.103979, Article 103979

2024

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Expression analysis and mapping of Viral-Host Protein interactions of Poxviridae suggests a lead candidate molecule targeting Mpox

BMC infectious diseases, 2024-05, Vol.24 (1), p.483-483, Article 483

2024

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Crosstalk between circadian clocks and pathogen niche

PLoS pathogens, 2024-05, Vol.20 (5), p.e1012157

2024

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Link prediction in protein–protein interaction network: A similarity multiplied similarity algorithm with paths of length three

Journal of theoretical biology, 2024-07, Vol.589, p.111850-111850, Article 111850

2024

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A screen for Plasmodium falciparum sporozoite surface protein binding to human hepatocyte surface receptors identifies novel host-pathogen interactions

Malaria journal, 2024-05, Vol.23 (1), p.151-151, Article 151

2024

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DDID: a comprehensive resource for visualization and analysis of diet-drug interactions

Briefings in bioinformatics, 2024-03, Vol.25 (3)

2024

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ZEPPI: Proteome-scale sequence-based evaluation of protein-protein interaction models

Proceedings of the National Academy of Sciences - PNAS, 2024-05, Vol.121 (21), p.e2400260121

2024

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Medication use among the oldest old in the Faroe Islands—A national cross‐sectional study

Basic & clinical pharmacology & toxicology, 2024-06, Vol.134 (6), p.833-845

2024

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Inhibition of insulin fibrillation by carboxyphenylboronic acid-modified chitosan oligosaccharide based on electrostatic interactions and hydrophobic interactions

Biophysical chemistry, 2024-07, Vol.310, p.107236-107236, Article 107236

2024

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The use of potentially interacting supplement–drug pairs in adults with type 2 diabetes: A large population-based cohort study in the UK Biobank

Diabetes research and clinical practice, 2024-05, Vol.211, p.111658-111658, Article 111658

2024

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Prevalence and differences in the co-administration of drugs known to interact: an analysis of three distinct and large populations

BMC medicine, 2024-04, Vol.22 (1), p.166-166, Article 166

2024

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Heat-moisture treatment can modulate all-purpose wheat flour for short dough biscuit making: Evidences and mechanism

Food chemistry, 2024-09, Vol.451, p.139512-139512, Article 139512

2024

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OASL suppresses infectious bursal disease virus replication by targeting VP2 for degrading through the autophagy pathway

Journal of virology, 2024-05, Vol.98 (5), p.e0018124

2024

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Influenza A virus NS1 effector domain is required for PA-X-mediated host shutoff in infected cells

Journal of virology, 2024-05, Vol.98 (5), p.e0190123

2024

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Toward a Categorization of Virus-ncRNA Interactions in the World of RNA to Disentangle the Tiny Secrets of Dengue Virus

Viruses, 2024-05, Vol.16 (5), p.804

2024

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Evidence for intracellular Pseudomonas aeruginosa

Journal of bacteriology, 2024-05, Vol.206 (5), p.e0010924

2024

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Flagellin-modulated inflammasome pathways characterize the human alveolar macrophage response to Burkholderia pseudomallei , a lung-tropic pathogen

Infection and immunity, 2024-05, Vol.92 (5), p.e0006024

2024

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A song for the past

The Lancet, 2024-06, Vol.403 (10442), p.2369-2369

De Ambrogi, Marco

2024

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Analysis and prediction of interactions between transmembrane and non-transmembrane proteins

BMC genomics, 2024-04, Vol.25 (Suppl 1), p.401-401, Article 401

2024

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Belief Updating during Social Interactions: Neural Dynamics and Causal Role of Dorsomedial Prefrontal Cortex

The Journal of neuroscience, 2024-05, Vol.44 (22)

2024

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A comprehensive review of protein-centric predictors for biomolecular interactions: from proteins to nucleic acids and beyond

GNNGL-PPI: multi-category prediction of protein-protein interactions using graph neural networks based on global graphs and local subgraphs

Protein features fusion using attributed network embedding for predicting protein-protein interaction

A variational expectation-maximization framework for balanced multi-scale learning of protein and drug interactions

Deciphering Staphylococcus aureus- host dynamics using dual activity-based protein profiling of ATP-interacting proteins

Multi-level bioinformatics resources support drug target discovery of protein–protein interactions

Expression analysis and mapping of Viral-Host Protein interactions of Poxviridae suggests a lead candidate molecule targeting Mpox

Crosstalk between circadian clocks and pathogen niche

Link prediction in protein–protein interaction network: A similarity multiplied similarity algorithm with paths of length three

A screen for Plasmodium falciparum sporozoite surface protein binding to human hepatocyte surface receptors identifies novel host-pathogen interactions

DDID: a comprehensive resource for visualization and analysis of diet-drug interactions

ZEPPI: Proteome-scale sequence-based evaluation of protein-protein interaction models

Medication use among the oldest old in the Faroe Islands—A national cross‐sectional study

Inhibition of insulin fibrillation by carboxyphenylboronic acid-modified chitosan oligosaccharide based on electrostatic interactions and hydrophobic interactions

The use of potentially interacting supplement–drug pairs in adults with type 2 diabetes: A large population-based cohort study in the UK Biobank

Prevalence and differences in the co-administration of drugs known to interact: an analysis of three distinct and large populations

Heat-moisture treatment can modulate all-purpose wheat flour for short dough biscuit making: Evidences and mechanism

OASL suppresses infectious bursal disease virus replication by targeting VP2 for degrading through the autophagy pathway

Influenza A virus NS1 effector domain is required for PA-X-mediated host shutoff in infected cells

Toward a Categorization of Virus-ncRNA Interactions in the World of RNA to Disentangle the Tiny Secrets of Dengue Virus

Evidence for intracellular Pseudomonas aeruginosa

Flagellin-modulated inflammasome pathways characterize the human alveolar macrophage response to Burkholderia pseudomallei , a lung-tropic pathogen

A song for the past

Analysis and prediction of interactions between transmembrane and non-transmembrane proteins

Belief Updating during Social Interactions: Neural Dynamics and Causal Role of Dorsomedial Prefrontal Cortex

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