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A heuristic approach to determine an appropriate number of topics in topic modeling

BMC bioinformatics, 2015-09, Vol.16 Suppl 13 (S13), p.S8-S8, Article S8

2015

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Assessment of performance of survival prediction models for cancer prognosis

BMC medical research methodology, 2012-07, Vol.12 (1), p.102-102, Article 102

2012

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Text mining for identifying topics in the literatures about adolescent substance use and depression

BMC public health, 2016-03, Vol.16 (279), p.279-8, Article 279

2016

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Use of data mining at the Food and Drug Administration

Journal of the American Medical Informatics Association : JAMIA, 2016-03, Vol.23 (2), p.428-434

2016

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Reproducibility of microarray data: a further analysis of microarray quality control (MAQC) data

BMC bioinformatics, 2007-10, Vol.8 (1), p.412-412, Article 412

2007

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Gene Set Correlation Analysis and Visualization Using Gene Expression Data

Current bioinformatics, 2021-01, Vol.16 (3), p.406-421

2021

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Power and sample size estimation in microarray studies

BMC bioinformatics, 2010-01, Vol.11 (1), p.48-48, Article 48

2010

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Cross-platform comparability of microarray technology: intra-platform consistency and appropriate data analysis procedures are essential

BMC bioinformatics, 2005-07, Vol.6 Suppl 2 (S2), p.S12-S12, Article S12

2005

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Identification of bicluster regions in a binary matrix and its applications

PloS one, 2013-08, Vol.8 (8), p.e71680-e71680

2013

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Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samples

BMC bioinformatics, 2008-08, Vol.9 Suppl 9 (S9), p.S17-S17, Article S17

2008

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A composite model for subgroup identification and prediction via bicluster analysis

PloS one, 2014-10, Vol.9 (10), p.e111318-e111318

2014

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Topic modeling for cluster analysis of large biological and medical datasets

BMC bioinformatics, 2014-10, Vol.15 Suppl 11 (Suppl 11), p.S11-S11, Article S11

2014

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Class-imbalanced classifiers for high-dimensional data

Briefings in bioinformatics, 2013-01, Vol.14 (1), p.13-26

2013

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Meta-analysis of pulsed-field gel electrophoresis fingerprints based on a constructed Salmonella database

PloS one, 2013-03, Vol.8 (3), p.e59224-e59224

2013

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Evaluation of Pulsed-Field Gel Electrophoresis Profiles for Identification of Salmonella Serotypes

Journal of Clinical Microbiology, 2010-09, Vol.48 (9), p.3122-3126

2010

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Reordering hierarchical tree based on bilateral symmetric distance

PloS one, 2011-08, Vol.6 (8), p.e22546-e22546

2011

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Prediction System for Rapid Identification of Salmonella Serotypes Based on Pulsed-Field Gel Electrophoresis Fingerprints

Journal of Clinical Microbiology, 2012-05, Vol.50 (5), p.1524-1532

2012

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Pubertal delay in male nonhuman primates (Macaca mulatta) treated with methylphenidate

Proceedings of the National Academy of Sciences - PNAS, 2011-09, Vol.108 (39), p.16301-16306

2011

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Development of biomarker classifiers from high-dimensional data

Briefings in bioinformatics, 2009-09, Vol.10 (5), p.537-546

2009

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Estimation of False Discovery Rates in Multiple Testing: Application to Gene Microarray Data

Biometrics, 2003-12, Vol.59 (4), p.1071-1081

2003

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Using Dietary Exposure and Physiologically Based Pharmacokinetic/Pharmacodynamic Modeling in Human Risk Extrapolations for Acrylamide Toxicity

Journal of agricultural and food chemistry, 2008-08, Vol.56 (15), p.6031-6038

2008

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Microarray scanner calibration curves: characteristics and implications

BMC bioinformatics, 2005-07, Vol.6 Suppl 2 (S2), p.S11-S11, Article S11

2005

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Gene selection with multiple ordering criteria

BMC bioinformatics, 2007-03, Vol.8 (1), p.74-74, Article 74

2007

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Multivariate analysis of variance test for gene set analysis

Bioinformatics, 2009-04, Vol.25 (7), p.897-903

2009

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Identification and categorization of liver toxicity markers induced by a related pair of drugs

International journal of molecular sciences, 2011-07, Vol.12 (7), p.4609-4624

2011

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A heuristic approach to determine an appropriate number of topics in topic modeling

Assessment of performance of survival prediction models for cancer prognosis

Text mining for identifying topics in the literatures about adolescent substance use and depression

Use of data mining at the Food and Drug Administration

Reproducibility of microarray data: a further analysis of microarray quality control (MAQC) data

Gene Set Correlation Analysis and Visualization Using Gene Expression Data

Power and sample size estimation in microarray studies

Cross-platform comparability of microarray technology: intra-platform consistency and appropriate data analysis procedures are essential

Identification of bicluster regions in a binary matrix and its applications

Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samples

A composite model for subgroup identification and prediction via bicluster analysis

Topic modeling for cluster analysis of large biological and medical datasets

Class-imbalanced classifiers for high-dimensional data

Meta-analysis of pulsed-field gel electrophoresis fingerprints based on a constructed Salmonella database

Evaluation of Pulsed-Field Gel Electrophoresis Profiles for Identification of Salmonella Serotypes

Reordering hierarchical tree based on bilateral symmetric distance

Prediction System for Rapid Identification of Salmonella Serotypes Based on Pulsed-Field Gel Electrophoresis Fingerprints

Pubertal delay in male nonhuman primates (Macaca mulatta) treated with methylphenidate

Development of biomarker classifiers from high-dimensional data

Estimation of False Discovery Rates in Multiple Testing: Application to Gene Microarray Data

Using Dietary Exposure and Physiologically Based Pharmacokinetic/Pharmacodynamic Modeling in Human Risk Extrapolations for Acrylamide Toxicity

Microarray scanner calibration curves: characteristics and implications

Gene selection with multiple ordering criteria

Multivariate analysis of variance test for gene set analysis

Identification and categorization of liver toxicity markers induced by a related pair of drugs

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