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Longitudinal assessment of sputum microbiome by sequencing of the 16S rRNA gene in non-cystic fibrosis bronchiectasis patients

PloS one, 2017-02, Vol.12 (2), p.e0170622-e0170622

2017

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Sputum Bacterial and Fungal Dynamics during Exacerbations of Severe COPD

PloS one, 2015-07, Vol.10 (7), p.e0130736-e0130736

2015

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The adult cystic fibrosis airway microbiota is stable over time and infection type, and highly resilient to antibiotic treatment of exacerbations

PloS one, 2012-09, Vol.7 (9), p.e45001

2012

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Rapid 16S rRNA next-generation sequencing of polymicrobial clinical samples for diagnosis of complex bacterial infections

PloS one, 2013-05, Vol.8 (5), p.e65226-e65226

2013

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Blood mRNA biomarkers distinguish variable systemic and sputum inflammation at treatment initiation of inhaled antibiotics in cystic fibrosis: A prospective non-randomized trial

PloS one, 2022-05, Vol.17 (5), p.e0267592-e0267592

2022

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Factors which contributed for low quality sputum smears for the detection of acid fast bacilli (AFB) at selected health centers in Ethiopia: A quality control perspective

PloS one, 2018-06, Vol.13 (6), p.e0198947-e0198947

2018

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Alcohol drinking delays the rate of sputum smear conversion among DR-TB patients in northwest Ethiopia; A retrospective follow-up study

PloS one, 2022-03, Vol.17 (3), p.e0264852-e0264852

2022

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Staphylococcus aureus induces an itaconate-dominated immunometabolic response that drives biofilm formation

Nature communications, 2021-03, Vol.12 (1), p.1399-13, Article 1399

2021

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Significant Effects of Oral Phenylbutyrate and Vitamin D3 Adjunctive Therapy in Pulmonary Tuberculosis: A Randomized Controlled Trial

PloS one, 2015-09, Vol.10 (9), p.e0138340-e0138340

2015

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Development and evaluation of novel bio-safe filter paper-based kits for sputum microscopy and transport to directly detect Mycobacterium tuberculosis and associated drug resistance

PloS one, 2019-08, Vol.14 (8), p.e0220967-e0220967

2019

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Population Dynamics and Control of Tuberculosis

Science (American Association for the Advancement of Science), 2010-05, Vol.328 (5980), p.856-861

2010

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Compensatory evolution of Pseudomonas aeruginosa's slow growth phenotype suggests mechanisms of adaptation in cystic fibrosis

Nature communications, 2021-05, Vol.12 (1), p.3186-15, Article 3186

2021

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Culture enriched molecular profiling of the cystic fibrosis airway microbiome

PloS one, 2011-07, Vol.6 (7), p.e22702-e22702

2011

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Activity and interactions of liposomal antibiotics in presence of polyanions and sputum of patients with cystic fibrosis

PloS one, 2009-05, Vol.4 (5), p.e5724

2009

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Regular Sputum Check-Up for Early Diagnosis of Tuberculosis after Exposure in Healthcare Facilities

PloS one, 2016-06, Vol.11 (6), p.e0157054-e0157054

2016

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Culture-Independent Identification of Nontuberculous Mycobacteria in Cystic Fibrosis Respiratory Samples

PloS one, 2016-04, Vol.11 (4), p.e0153876-e0153876

2016

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Data Mining of Lung Microbiota in Cystic Fibrosis Patients

PloS one, 2016-10, Vol.11 (10), p.e0164510-e0164510

2016

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Population structure of mixed Mycobacterium tuberculosis infection is strain genotype and culture medium dependent

PloS one, 2013-07, Vol.8 (7), p.e70178-e70178

2013

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New Short Tandem Repeat-Based Molecular Typing Method for Pneumocystis jirovecii Reveals Intrahospital Transmission between Patients from Different Wards

PloS one, 2015-05, Vol.10 (5), p.e0125763-e0125763

2015

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Rapid diagnosis of smear-negative tuberculosis using immunology and microbiology with induced sputum in HIV-infected and uninfected individuals

PloS one, 2007-12, Vol.2 (12), p.e1335-e1335

2007

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Structural stability of Burkholderia cenocepacia biofilms is reliant on eDNA structure and presence of a bacterial nucleic acid binding protein

PloS one, 2013-06, Vol.8 (6), p.e67629-e67629

2013

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Implementing the Xpert® MTB/RIF Diagnostic Test for Tuberculosis and Rifampicin Resistance: Outcomes and Lessons Learned in 18 Countries

PloS one, 2015-12, Vol.10 (12), p.e0144656-e0144656

2015

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Characteristics of Patients with Smear-Negative Pulmonary Tuberculosis (TB) in a Region with High TB and HIV Prevalence

PloS one, 2016-01, Vol.11 (1), p.e0147933-e0147933

2016

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Increased production of IL-4 and IL-12p40 from bronchoalveolar lavage cells are biomarkers of Mycobacterium tuberculosis in the sputum

PloS one, 2013-03, Vol.8 (3), p.e59461-e59461

2013

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Longitudinal assessment of sputum microbiome by sequencing of the 16S rRNA gene in non-cystic fibrosis bronchiectasis patients

Sputum Bacterial and Fungal Dynamics during Exacerbations of Severe COPD

The adult cystic fibrosis airway microbiota is stable over time and infection type, and highly resilient to antibiotic treatment of exacerbations

Rapid 16S rRNA next-generation sequencing of polymicrobial clinical samples for diagnosis of complex bacterial infections

Blood mRNA biomarkers distinguish variable systemic and sputum inflammation at treatment initiation of inhaled antibiotics in cystic fibrosis: A prospective non-randomized trial

Factors which contributed for low quality sputum smears for the detection of acid fast bacilli (AFB) at selected health centers in Ethiopia: A quality control perspective

Alcohol drinking delays the rate of sputum smear conversion among DR-TB patients in northwest Ethiopia; A retrospective follow-up study

Staphylococcus aureus induces an itaconate-dominated immunometabolic response that drives biofilm formation

Significant Effects of Oral Phenylbutyrate and Vitamin D3 Adjunctive Therapy in Pulmonary Tuberculosis: A Randomized Controlled Trial

Development and evaluation of novel bio-safe filter paper-based kits for sputum microscopy and transport to directly detect Mycobacterium tuberculosis and associated drug resistance

Population Dynamics and Control of Tuberculosis

Compensatory evolution of Pseudomonas aeruginosa's slow growth phenotype suggests mechanisms of adaptation in cystic fibrosis

Culture enriched molecular profiling of the cystic fibrosis airway microbiome

Activity and interactions of liposomal antibiotics in presence of polyanions and sputum of patients with cystic fibrosis

Regular Sputum Check-Up for Early Diagnosis of Tuberculosis after Exposure in Healthcare Facilities

Culture-Independent Identification of Nontuberculous Mycobacteria in Cystic Fibrosis Respiratory Samples

Data Mining of Lung Microbiota in Cystic Fibrosis Patients

Etiologic diagnosis of lower respiratory tract bacterial infections using sputum samples and quantitative loop-mediated isothermal amplification

Population structure of mixed Mycobacterium tuberculosis infection is strain genotype and culture medium dependent

New Short Tandem Repeat-Based Molecular Typing Method for Pneumocystis jirovecii Reveals Intrahospital Transmission between Patients from Different Wards

Rapid diagnosis of smear-negative tuberculosis using immunology and microbiology with induced sputum in HIV-infected and uninfected individuals

Structural stability of Burkholderia cenocepacia biofilms is reliant on eDNA structure and presence of a bacterial nucleic acid binding protein

Implementing the Xpert® MTB/RIF Diagnostic Test for Tuberculosis and Rifampicin Resistance: Outcomes and Lessons Learned in 18 Countries

Characteristics of Patients with Smear-Negative Pulmonary Tuberculosis (TB) in a Region with High TB and HIV Prevalence

Increased production of IL-4 and IL-12p40 from bronchoalveolar lavage cells are biomarkers of Mycobacterium tuberculosis in the sputum

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