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Sex biased expression and co-expression networks in development, using the hymenopteran Nasonia vitripennis

PLoS genetics, 2020-01, Vol.16 (1), p.e1008518-e1008518

2020

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Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx

BMC genomics, 2009-05, Vol.10 (219), p.219-219

2009

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Multiple origins of pyrethroid insecticide resistance across the species complex of a nontarget aquatic crustacean, Hyalella azteca

Proceedings of the National Academy of Sciences - PNAS, 2013-10, Vol.110 (41), p.16532-16537

2013

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The hologenome of Daphnia magna reveals possible DNA methylation and microbiome-mediated evolution of the host genome

Nucleic acids research, 2023-10, Vol.51 (18), p.9785-9803

2023

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Extensive standing genetic variation from a small number of founders enables rapid adaptation in Daphnia

Nature communications, 2021-07, Vol.12 (1), p.4306-4306, Article 4306

2021

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Broccoli: Combining Phylogenetic and Network Analyses for Orthology Assignment

Molecular biology and evolution, 2020-11, Vol.37 (11), p.3389-3396

2020

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A molecular mechanism for environmental sex determination

Trends in genetics, 2024-07

2024

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Testosterone affects neural gene expression differently in male and female juncos: a role for hormones in mediating sexual dimorphism and conflict

PloS one, 2013-04, Vol.8 (4), p.e61784

2013

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The transcriptomic and proteomic responses of Daphnia pulex to changes in temperature and food supply comprise environment-specific and clone-specific elements

BMC genomics, 2018-05, Vol.19 (1), p.376-376, Article 376

2018

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100 years of anthropogenic impact causes changes in freshwater functional biodiversity

eLife, 2023-11, Vol.12

2023

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Combined exome and transcriptome sequencing of non-muscle-invasive bladder cancer: associations between genomic changes, expression subtypes, and clinical outcomes

Genome medicine, 2022-06, Vol.14 (1), p.59-16, Article 59

2022

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Toxicity by descent: A comparative approach for chemical hazard assessment

Environmental advances, 2022-10, Vol.9, p.100287, Article 100287

2022

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A novel method to derive a human safety limit for PFOA by gene expression profiling and modelling

Frontiers in toxicology, 2024-03, Vol.6, p.1368320-1368320

2024

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The genomic landscape of rapid repeated evolutionary adaptation to toxic pollution in wild fish

Science (American Association for the Advancement of Science), 2016-12, Vol.354 (6317), p.1305-1308

2016

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Thermal variation and factors influencing vertical migration behavior in Daphnia populations

Journal of thermal biology, 2016-08, Vol.60, p.70-78

2016

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wFleaBase: the Daphnia genome database

BMC bioinformatics, 2005-03, Vol.6 (1), p.45-45, Article 45

2005

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How omics technologies can enhance chemical safety regulation: perspectives from academia, government, and industry: The Perspectives column is a regular series designed to discuss and evaluate potentially competing viewpoints and research findings on current environmental issues

Environmental toxicology and chemistry, 2018-05, Vol.37 (5), p.1252

2018

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Gene response profiles for Daphnia pulex exposed to the environmental stressor cadmium reveals novel crustacean metallothioneins

BMC genomics, 2007-12, Vol.8 (1), p.477-477

2007

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Multigenerational Exposure to Nano‐TiO2 Induces Ageing as a Stress Response Mitigated by Environmental Interactions

Advanced NanoBiomed Research (Online), 2021-06, Vol.1 (6), p.n/a

2021

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Daphnia as a Sentinel Species for Environmental Health Protection: A Perspective on Biomonitoring and Bioremediation of Chemical Pollution

Environmental science & technology, 2022-10, Vol.56 (20), p.14237-14248

2022

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Scan, extract, wrap, compute-a 3D method to analyse morphological shape differences

PeerJ (San Francisco, CA), 2018-06, Vol.6, p.e4861-e4861, Article e4861

2018

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Improved Algal Toxicity Test System for Robust Omics -Driven Mode-of-Action Discovery in Chlamydomonas reinhardtii

Metabolites, 2019-05, Vol.9 (5), p.94

2019

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Mixtures of Aluminum and Indium Induce More than Additive Phenotypic and Toxicogenomic Responses in Daphnia magna

Environmental science & technology, 2019-02, Vol.53 (3), p.1639-1649

2019

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The evolution of salinity tolerance in Daphnia: a functional genomics approach

Ecology letters, 2012-08, Vol.15 (8), p.794-802

2012

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Sex biased expression and co-expression networks in development, using the hymenopteran Nasonia vitripennis

Sequencing and de novo analysis of a coral larval transcriptome using 454 GSFlx

Multiple origins of pyrethroid insecticide resistance across the species complex of a nontarget aquatic crustacean, Hyalella azteca

The hologenome of Daphnia magna reveals possible DNA methylation and microbiome-mediated evolution of the host genome

Extensive standing genetic variation from a small number of founders enables rapid adaptation in Daphnia

Broccoli: Combining Phylogenetic and Network Analyses for Orthology Assignment

A molecular mechanism for environmental sex determination

Testosterone affects neural gene expression differently in male and female juncos: a role for hormones in mediating sexual dimorphism and conflict

The transcriptomic and proteomic responses of Daphnia pulex to changes in temperature and food supply comprise environment-specific and clone-specific elements

100 years of anthropogenic impact causes changes in freshwater functional biodiversity

Combined exome and transcriptome sequencing of non-muscle-invasive bladder cancer: associations between genomic changes, expression subtypes, and clinical outcomes

Toxicity by descent: A comparative approach for chemical hazard assessment

A novel method to derive a human safety limit for PFOA by gene expression profiling and modelling

The genomic landscape of rapid repeated evolutionary adaptation to toxic pollution in wild fish

Thermal variation and factors influencing vertical migration behavior in Daphnia populations

wFleaBase: the Daphnia genome database

How omics technologies can enhance chemical safety regulation: perspectives from academia, government, and industry: The Perspectives column is a regular series designed to discuss and evaluate potentially competing viewpoints and research findings on current environmental issues

Gene response profiles for Daphnia pulex exposed to the environmental stressor cadmium reveals novel crustacean metallothioneins

Multigenerational Exposure to Nano‐TiO2 Induces Ageing as a Stress Response Mitigated by Environmental Interactions

New approach methods to assess developmental and adult neurotoxicity for regulatory use: a PARC work package 5 project

Daphnia as a Sentinel Species for Environmental Health Protection: A Perspective on Biomonitoring and Bioremediation of Chemical Pollution

Scan, extract, wrap, compute-a 3D method to analyse morphological shape differences

Improved Algal Toxicity Test System for Robust Omics -Driven Mode-of-Action Discovery in Chlamydomonas reinhardtii

Mixtures of Aluminum and Indium Induce More than Additive Phenotypic and Toxicogenomic Responses in Daphnia magna

The evolution of salinity tolerance in Daphnia: a functional genomics approach

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