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Human tRNA synthetase catalytic nulls with diverse functions

Science (American Association for the Advancement of Science), 2014-07, Vol.345 (6194), p.328-332

2014

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The blooming of long-read sequencing reforms biomedical research

Genome Biology, 2022-01, Vol.23 (1), p.21-4, Article 21

Au, Kin Fai

2022

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A comparative evaluation of hybrid error correction methods for error-prone long reads

Genome Biology, 2019-02, Vol.20 (1), p.26-17, Article 26

2019

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Performance difference of graph-based and alignment-based hybrid error correction methods for error-prone long reads

Genome Biology, 2020-01, Vol.21 (1), p.14-14, Article 14

2020

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Improving PacBio long read accuracy by short read alignment

PloS one, 2012-10, Vol.7 (10), p.e46679-e46679

2012

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Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis

Nature communications, 2017-07, Vol.8 (1), p.59-59, Article 59

2017

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A network-based computational framework to predict and differentiate functions for gene isoforms using exon-level expression data

Methods (San Diego, Calif.), 2021-05, Vol.189, p.54-64

2021

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One is not enough: On the effects of reference genome for the mapping and subsequent analyses of short-reads

PLoS computational biology, 2021-01, Vol.17 (1), p.e1008678-e1008678

2021

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Comprehensive comparison of Pacific Biosciences and Oxford Nanopore Technologies and their applications to transcriptome analysis [version 2; peer review: 2 approved]

F1000 research, 2017, Vol.6, p.100

2017

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Real-time resolution of short-read assembly graph using ONT long reads

PLoS computational biology, 2021-01, Vol.17 (1), p.e1008586-e1008586

2021

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A Statistical Method for Observing Personal Diploid Methylomes and Transcriptomes with Single-Molecule Real-Time Sequencing

Genes, 2018-09, Vol.9 (9), p.460

2018

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Hybrid Sequencing of Full-Length cDNA Transcripts of Stems and Leaves in Dendrobium officinale

Genes, 2017-10, Vol.8 (10), p.257

2017

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Single cell expression analysis of primate-specific retroviruses-derived HPAT lincRNAs in viable human blastocysts identifies embryonic cells co-expressing genetic markers of multiple lineages

Heliyon, 2018-06, Vol.4 (6), p.e00667-e00667, Article e00667

2018

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Discovery of novel determinants of endothelial lineage using chimeric heterokaryons

eLife, 2017-03, Vol.6

2017

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Nanopore sequencing technology, bioinformatics and applications

Nature biotechnology, 2021-11, Vol.39 (11), p.1348-1365

2021

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Real-time mapping of nanopore raw signals

Bioinformatics, 2021-07, Vol.37 (Supplement_1), p.i477-i483

2021

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The transcriptome of human pluripotent stem cells

Current opinion in genetics & development, 2014-10, Vol.28, p.71-77

2014

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Revealing tumor heterogeneity of breast cancer by utilizing the linkage between somatic and germline mutations

Briefings in bioinformatics, 2019-11, Vol.20 (6), p.2306-2315

2019

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IDP-denovo: de novo transcriptome assembly and isoform annotation by hybrid sequencing

Bioinformatics, 2018-07, Vol.34 (13), p.2168-2176

2018

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Abstract 830: New bioinformatics workflow of genome-wide CRISPR-Cas9 knockout screens

Cancer research (Chicago, Ill.), 2020-08, Vol.80 (16_Supplement), p.830-830

2020

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The RNA m6A landscape of mouse oocytes and preimplantation embryos

Nature structural & molecular biology, 2023-05, Vol.30 (5), p.703-709

2023

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CEDA: integrating gene expression data with CRISPR-pooled screen data identifies essential genes with higher expression

Bioinformatics (Oxford, England), 2022-11, Vol.38 (23), p.5245-5252

2022

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iASPP mediates p53 selectivity through a modular mechanism fine-tuning DNA recognition

Proceedings of the National Academy of Sciences - PNAS, 2019-08, Vol.116 (35), p.17470-17479

2019

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Single-cell m6A mapping in vivo using picoMeRIP–seq

Nature biotechnology, 2024-04, Vol.42 (4), p.591-596

2024

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Accurate mapping of RNA-Seq data

Methods in molecular biology (Clifton, N.J.), 2015, Vol.1269, p.147

Au, Kin Fai

2015

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Human tRNA synthetase catalytic nulls with diverse functions

The blooming of long-read sequencing reforms biomedical research

A comparative evaluation of hybrid error correction methods for error-prone long reads

Performance difference of graph-based and alignment-based hybrid error correction methods for error-prone long reads

Improving PacBio long read accuracy by short read alignment

Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis

A network-based computational framework to predict and differentiate functions for gene isoforms using exon-level expression data

One is not enough: On the effects of reference genome for the mapping and subsequent analyses of short-reads

Comprehensive comparison of Pacific Biosciences and Oxford Nanopore Technologies and their applications to transcriptome analysis [version 2; peer review: 2 approved]

Real-time resolution of short-read assembly graph using ONT long reads

A Statistical Method for Observing Personal Diploid Methylomes and Transcriptomes with Single-Molecule Real-Time Sequencing

Hybrid Sequencing of Full-Length cDNA Transcripts of Stems and Leaves in Dendrobium officinale

Single cell expression analysis of primate-specific retroviruses-derived HPAT lincRNAs in viable human blastocysts identifies embryonic cells co-expressing genetic markers of multiple lineages

Discovery of novel determinants of endothelial lineage using chimeric heterokaryons

Nanopore sequencing technology, bioinformatics and applications

Real-time mapping of nanopore raw signals

The transcriptome of human pluripotent stem cells

Revealing tumor heterogeneity of breast cancer by utilizing the linkage between somatic and germline mutations

IDP-denovo: de novo transcriptome assembly and isoform annotation by hybrid sequencing

Abstract 830: New bioinformatics workflow of genome-wide CRISPR-Cas9 knockout screens

The RNA m6A landscape of mouse oocytes and preimplantation embryos

CEDA: integrating gene expression data with CRISPR-pooled screen data identifies essential genes with higher expression

iASPP mediates p53 selectivity through a modular mechanism fine-tuning DNA recognition

Single-cell m6A mapping in vivo using picoMeRIP–seq

Accurate mapping of RNA-Seq data

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