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jPHYDIT: a JAVA-based integrated environment for molecular phylogeny of ribosomal RNA sequences

Bioinformatics, 2005-07, Vol.21 (14), p.3171-3173

2005

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Excessive seismicity over a limited source: the August 2019 earthquake swarm near Mt. Salak in West Java (Indonesia)

Journal of seismology, 2020-12, Vol.24 (6), p.1189-1204

2020

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MpTheory Java library: a multi-platform Java library for systems biology based on the Metabolic P theory

Bioinformatics, 2015-04, Vol.31 (8), p.1328-1330

2015

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HALO—a Java framework for precise transcript half-life determination

Bioinformatics, 2010-05, Vol.26 (9), p.1264-1266

2010

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jSquid: a Java applet for graphical on-line network exploration

Bioinformatics, 2008-06, Vol.24 (12), p.1467-1468

2008

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Implementing the Gaia Astrometric Global Iterative Solution (AGIS) in Java

Experimental astronomy, 2011-12, Vol.31 (2-3), p.215-241

2011

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PARCS Technology: Concept and Implementations

Cybernetics and systems analysis, 2023-09, Vol.59 (5), p.832-843

2023

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The GlycomeAtlas tool for visualizing and querying glycome data

Bioinformatics, 2012-11, Vol.28 (21), p.2849-2850

2012

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The System PARCS-JAVA for Parallel Computations on Computer Networks

Cybernetics and systems analysis, 2005-01, Vol.41 (1), p.17-26

2005

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Ontologizer 2.0—a multifunctional tool for GO term enrichment analysis and data exploration

Bioinformatics, 2008-07, Vol.24 (14), p.1650-1651

2008

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A Combined Global & Local Search (CGLS) Approach to Global Optimization

Journal of global optimization, 2006-03, Vol.34 (3), p.409-426

2006

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ARACNe-AP: gene network reverse engineering through adaptive partitioning inference of mutual information

Bioinformatics (Oxford, England), 2016-07, Vol.32 (14), p.2233-2235

2016

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BMRF-Net: a software tool for identification of protein interaction subnetworks by a bagging Markov random field-based method

Bioinformatics, 2015-07, Vol.31 (14), p.2412-2414

2015

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ABNER: an open source tool for automatically tagging genes, proteins and other entity names in text

Bioinformatics, 2005-07, Vol.21 (14), p.3191-3192

SETTLES, Burr

2005

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Using chemical organization theory for model checking

Bioinformatics, 2009-08, Vol.25 (15), p.1915-1922

2009

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KAnalyze: a fast versatile pipelined k-mer toolkit

Bioinformatics (Oxford, England), 2014-07, Vol.30 (14), p.2070-2072

2014

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MutationFinder: a high-performance system for extracting point mutation mentions from text

Bioinformatics, 2007-07, Vol.23 (14), p.1862-1865

2007

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The GCTx format and cmap{Py, R, M, J} packages: resources for optimized storage and integrated traversal of annotated dense matrices

Bioinformatics, 2019-04, Vol.35 (8), p.1427-1429

2019

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Correction of sequencing errors in a mixed set of reads

Bioinformatics, 2010-05, Vol.26 (10), p.1284-1290

SALMELA, Leena

2010

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Lipid Data Analyzer: unattended identification and quantitation of lipids in LC-MS data

Bioinformatics (Oxford, England), 2011-02, Vol.27 (4), p.572-577

2011

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CLICK and EXPANDER: a system for clustering and visualizing gene expression data

Bioinformatics, 2003-09, Vol.19 (14), p.1787-1799

2003

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SPECTRE: a suite of phylogenetic tools for reticulate evolution

Bioinformatics, 2018-03, Vol.34 (6), p.1056-1057

2018

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The automation of Nested Clade Phylogeographic Analysis

Bioinformatics, 2007-02, Vol.23 (4), p.509-510

Panchal, Mahesh

2007

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Novel encryption technique for security enhancement in optical code division multiple access

Photonic network communications, 2020-06, Vol.39 (3), p.195-222

2020

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GenomeVISTA--an integrated software package for whole-genome alignment and visualization

Bioinformatics (Oxford, England), 2014-09, Vol.30 (18), p.2654-2655

2014

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jPHYDIT: a JAVA-based integrated environment for molecular phylogeny of ribosomal RNA sequences

Excessive seismicity over a limited source: the August 2019 earthquake swarm near Mt. Salak in West Java (Indonesia)

MpTheory Java library: a multi-platform Java library for systems biology based on the Metabolic P theory

HALO—a Java framework for precise transcript half-life determination

jSquid: a Java applet for graphical on-line network exploration

Implementing the Gaia Astrometric Global Iterative Solution (AGIS) in Java

PARCS Technology: Concept and Implementations

The GlycomeAtlas tool for visualizing and querying glycome data

The System PARCS-JAVA for Parallel Computations on Computer Networks

Ontologizer 2.0—a multifunctional tool for GO term enrichment analysis and data exploration

A Combined Global & Local Search (CGLS) Approach to Global Optimization

ARACNe-AP: gene network reverse engineering through adaptive partitioning inference of mutual information

BMRF-Net: a software tool for identification of protein interaction subnetworks by a bagging Markov random field-based method

ABNER: an open source tool for automatically tagging genes, proteins and other entity names in text

Using chemical organization theory for model checking

KAnalyze: a fast versatile pipelined k-mer toolkit

MutationFinder: a high-performance system for extracting point mutation mentions from text

The GCTx format and cmap{Py, R, M, J} packages: resources for optimized storage and integrated traversal of annotated dense matrices

Correction of sequencing errors in a mixed set of reads

Lipid Data Analyzer: unattended identification and quantitation of lipids in LC-MS data

CLICK and EXPANDER: a system for clustering and visualizing gene expression data

SPECTRE: a suite of phylogenetic tools for reticulate evolution

The automation of Nested Clade Phylogeographic Analysis

Novel encryption technique for security enhancement in optical code division multiple access

GenomeVISTA--an integrated software package for whole-genome alignment and visualization

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