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Combined metabolome and transcriptome analysis reveal the mechanism of water stress in Ophiocordyceps sinensis

BMC genomics, 2024-10, Vol.25 (1), p.1014-15, Article 1014

2024

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Development and validation of a 66K SNP array for the hard clam (Mercenaria mercenaria)

BMC genomics, 2024-09, Vol.25 (1), p.847-15, Article 847

2024

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Exploring the Sublethal Impacts of Cu and Zn on Daphnia magna: a transcriptomic perspective

BMC genomics, 2024-08, Vol.25 (1), p.790-18

2024

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Pangenome analysis of Shewanella xiamenensis revealed important genetic traits concerning genetic diversity, pathogenicity and antibiotic resistance

BMC genomics, 2024-02, Vol.25 (1), p.216-216, Article 216

2024

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GenoMycAnalyzer: a web-based tool for species and drug resistance prediction for Mycobacterium genomes

BMC genomics, 2024-04, Vol.25 (1), p.387-387, Article 387

2024

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Transcriptomic profiling reveals the complex interaction between a bipartite begomovirus and a cucurbitaceous host plant

BMC genomics, 2024-09, Vol.25 (1), p.876-12, Article 876

2024

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Meta-analysis across Nellore cattle populations identifies common metabolic mechanisms that regulate feed efficiency-related traits

BMC genomics, 2022-06, Vol.23 (1), p.424-424, Article 424

2022

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Genome-wide association study identifies novel susceptible loci and evaluation of polygenic risk score for chronic obstructive pulmonary disease in a Taiwanese population

BMC genomics, 2024-06, Vol.25 (1), p.607-16

2024

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ATACseqQC: a Bioconductor package for post-alignment quality assessment of ATAC-seq data

BMC genomics, 2018-03, Vol.19 (1), p.169-13, Article 169

2018

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WebMGA: a customizable web server for fast metagenomic sequence analysis

BMC genomics, 2011-09, Vol.12 (1), p.444-444, Article 444

2011

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A single workflow for multi-species blood transcriptomics

BMC genomics, 2024-03, Vol.25 (1), p.282-282, Article 282

2024

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Quality filtering of Illumina index reads mitigates sample cross-talk

BMC genomics, 2016-11, Vol.17 (1), p.876-876, Article 876

2016

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Genome-wide landscape of runs of homozygosity and differentiation across Egyptian goat breeds

BMC genomics, 2023-09, Vol.24 (1), p.1-573, Article 573

2023

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A high fidelity approach to assembling the complex Borrelia genome

BMC genomics, 2023-07, Vol.24 (1), p.401-401, Article 401

2023

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Identifying low-density, ancestry-informative SNP markers through whole genome resequencing in Indian, Chinese, and wild yak

BMC genomics, 2024-11, Vol.25 (1), p.1-16, Article 1043

2024

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Runs of homozygosity analysis of South African sheep breeds from various production systems investigated using OvineSNP50k data

BMC genomics, 2021-01, Vol.22 (1), p.7-7, Article 7

2021

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Detection and evaluation of parameters influencing the identification of heterozygous-enriched regions in Holstein cattle based on SNP chip or whole-genome sequence data

BMC genomics, 2024-07, Vol.25 (1), p.726-18, Article 726

2024

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Dynamics of rumen gene expression, microbiome colonization, and their interplay in goats

BMC genomics, 2021-04, Vol.22 (1), p.288-288, Article 288

2021

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Single-cell profiling reveals transcriptome dynamics during bovine oocyte growth

BMC genomics, 2024-04, Vol.25 (1), p.335-335, Article 335

2024

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High-fidelity (repeat) consensus sequences from short reads using combined read clustering and assembly

BMC genomics, 2024-01, Vol.25 (1), p.109-11, Article 109

2024

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RNA-QC-chain: comprehensive and fast quality control for RNA-Seq data

BMC genomics, 2018-02, Vol.19 (1), p.144-144, Article 144

2018

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Species diversity analysis of commercial Mantidis Ootheca samples contaminated by store pests based on DNA metabarcoding

BMC genomics, 2022-10, Vol.23 (1), p.1-720, Article 720

2022

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Inferring and analyzing gene regulatory networks from multi-factorial expression data: a complete and interactive suite

BMC genomics, 2021-05, Vol.22 (1), p.1-387, Article 387

2021

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amica: an interactive and user-friendly web-platform for the analysis of proteomics data

BMC genomics, 2022-12, Vol.23 (1), p.817-817, Article 817

2022

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Enhancing RNA-seq bias mitigation with the Gaussian self-benchmarking framework: towards unbiased sequencing data

BMC genomics, 2024-09, Vol.25 (1), p.904-19, Article 904

2024

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Combined metabolome and transcriptome analysis reveal the mechanism of water stress in Ophiocordyceps sinensis

Development and validation of a 66K SNP array for the hard clam (Mercenaria mercenaria)

Exploring the Sublethal Impacts of Cu and Zn on Daphnia magna: a transcriptomic perspective

Pangenome analysis of Shewanella xiamenensis revealed important genetic traits concerning genetic diversity, pathogenicity and antibiotic resistance

GenoMycAnalyzer: a web-based tool for species and drug resistance prediction for Mycobacterium genomes

Transcriptomic profiling reveals the complex interaction between a bipartite begomovirus and a cucurbitaceous host plant

Meta-analysis across Nellore cattle populations identifies common metabolic mechanisms that regulate feed efficiency-related traits

Genome-wide association study identifies novel susceptible loci and evaluation of polygenic risk score for chronic obstructive pulmonary disease in a Taiwanese population

ATACseqQC: a Bioconductor package for post-alignment quality assessment of ATAC-seq data

WebMGA: a customizable web server for fast metagenomic sequence analysis

A single workflow for multi-species blood transcriptomics

Quality filtering of Illumina index reads mitigates sample cross-talk

Genome-wide landscape of runs of homozygosity and differentiation across Egyptian goat breeds

A high fidelity approach to assembling the complex Borrelia genome

Identifying low-density, ancestry-informative SNP markers through whole genome resequencing in Indian, Chinese, and wild yak

Runs of homozygosity analysis of South African sheep breeds from various production systems investigated using OvineSNP50k data

Detection and evaluation of parameters influencing the identification of heterozygous-enriched regions in Holstein cattle based on SNP chip or whole-genome sequence data

Dynamics of rumen gene expression, microbiome colonization, and their interplay in goats

Single-cell profiling reveals transcriptome dynamics during bovine oocyte growth

High-fidelity (repeat) consensus sequences from short reads using combined read clustering and assembly

RNA-QC-chain: comprehensive and fast quality control for RNA-Seq data

Species diversity analysis of commercial Mantidis Ootheca samples contaminated by store pests based on DNA metabarcoding

Inferring and analyzing gene regulatory networks from multi-factorial expression data: a complete and interactive suite

amica: an interactive and user-friendly web-platform for the analysis of proteomics data

Enhancing RNA-seq bias mitigation with the Gaussian self-benchmarking framework: towards unbiased sequencing data

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