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Global chemical effects of the microbiome include new bile-acid conjugations

Nature (London), 2020-03, Vol.579 (7797), p.123-129

2020

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3D molecular cartography using LC-MS facilitated by Optimus and 'ili software

Nature protocols, 2018-01, Vol.13 (1), p.134-154

2018

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The impact of skin care products on skin chemistry and microbiome dynamics

BMC biology, 2019-06, Vol.17 (1), p.47-20, Article 47

2019

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Identification of the Bacterial Biosynthetic Gene Clusters of the Oral Microbiome Illuminates the Unexplored Social Language of Bacteria during Health and Disease

mBio, 2019-04, Vol.10 (2)

2019

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Untargeted mass spectrometry-based metabolomics approach unveils molecular changes in raw and processed foods and beverages

Food chemistry, 2020-01, Vol.302, p.125290-125290, Article 125290

2020

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Prioritizing Natural Product Diversity in a Collection of 146 Bacterial Strains Based on Growth and Extraction Protocols

Journal of natural products (Washington, D.C.), 2017-03, Vol.80 (3), p.588-597

2017

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Coupling Targeted and Untargeted Mass Spectrometry for Metabolome-Microbiome-Wide Association Studies of Human Fecal Samples

Analytical chemistry (Washington), 2017-07, Vol.89 (14), p.7549-7559

2017

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Microbial and Nonvolatile Chemical Diversities of Chinese Dark Teas Are Differed by Latitude and Pile Fermentation

Journal of agricultural and food chemistry, 2022-05, Vol.70 (18), p.5701-5714

2022

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Mass spectrometry tools and workflows for revealing microbial chemistry

Analyst (London), 2015-08, Vol.140 (15), p.4949-4966

2015

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Mass Spectrometry Uncovers the Role of Surfactin as an Interspecies Recruitment Factor

ACS chemical biology, 2019-03, Vol.14 (3), p.459-467

2019

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Feature-Based Molecular Networking Analysis of the Metabolites Produced by In Vitro Solid-State Fermentation Reveals Pathways for the Bioconversion of Epigallocatechin Gallate

Journal of agricultural and food chemistry, 2020-07, Vol.68 (30), p.7995-8007

2020

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Intermittent Hypoxia and Hypercapnia, a Hallmark of Obstructive Sleep Apnea, Alters the Gut Microbiome and Metabolome

mSystems, 2018-05, Vol.3 (3)

2018

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SIRIUS 4: a rapid tool for turning tandem mass spectra into metabolite structure information

Nature methods, 2019-04, Vol.16 (4), p.299

2019

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The Molecular Effect of Wearing Silver-Threaded Clothing on the Human Skin

mSystems, 2023-02, Vol.8 (1), p.e0092222-e0092222

2023

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Indexing the Pseudomonas specialized metabolome enabled the discovery of poaeamide B and the bananamides

Nature microbiology, 2016-10, Vol.2, p.16197

2016

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Multi-omic approach to decipher the impact of skincare products with pre/postbiotics on skin microbiome and metabolome

Frontiers in medicine, 2023-07, Vol.10, p.1165980-1165980

2023

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Best practices for analysing microbiomes

Nature reviews. Microbiology, 2018-07, Vol.16 (7), p.410-422

2018

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Metabolic Profiling of Interspecies Interactions During Sessile Bacterial Cultivation Reveals Growth and Sporulation Induction in Paenibacillus amylolyticus in Response to Xanthomonas retroflexus

Frontiers in cellular and infection microbiology, 2022-03, Vol.12, p.805473-805473

2022

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Antimicrobials from human skin commensal bacteria protect against Staphylococcus aureus and are deficient in atopic dermatitis

Science translational medicine, 2017-02, Vol.9 (378)

2017

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Intermittent Hypoxia and Hypercapnia Reproducibly Change the Gut Microbiome and Metabolome across Rodent Model Systems

mSystems, 2019-03, Vol.4 (2)

2019

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B. infantis EVC001 Is Well-Tolerated and Improves Human Milk Oligosaccharide Utilization in Preterm Infants in the Neonatal Intensive Care Unit

Frontiers in pediatrics, 2022-01, Vol.9, p.795970-795970

2022

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ReDU: a framework to find and reanalyze public mass spectrometry data

Nature methods, 2020-09, Vol.17 (9), p.901

2020

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From Sample to Multi-Omics Conclusions in under 48 Hours

mSystems, 2016-03, Vol.1 (2)

2016

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Lugdunomycin, an Angucycline‐Derived Molecule with Unprecedented Chemical Architecture

Angewandte Chemie (International ed.), 2019-02, Vol.58 (9), p.2809-2814

International ed. in English, 2019

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Global chemical effects of the microbiome include new bile-acid conjugations

3D molecular cartography using LC-MS facilitated by Optimus and 'ili software

The impact of skin care products on skin chemistry and microbiome dynamics

Identification of the Bacterial Biosynthetic Gene Clusters of the Oral Microbiome Illuminates the Unexplored Social Language of Bacteria during Health and Disease

Untargeted mass spectrometry-based metabolomics approach unveils molecular changes in raw and processed foods and beverages

Prioritizing Natural Product Diversity in a Collection of 146 Bacterial Strains Based on Growth and Extraction Protocols

Coupling Targeted and Untargeted Mass Spectrometry for Metabolome-Microbiome-Wide Association Studies of Human Fecal Samples

Microbial and Nonvolatile Chemical Diversities of Chinese Dark Teas Are Differed by Latitude and Pile Fermentation

Mass spectrometry tools and workflows for revealing microbial chemistry

Mass Spectrometry Uncovers the Role of Surfactin as an Interspecies Recruitment Factor

Feature-Based Molecular Networking Analysis of the Metabolites Produced by In Vitro Solid-State Fermentation Reveals Pathways for the Bioconversion of Epigallocatechin Gallate

Intermittent Hypoxia and Hypercapnia, a Hallmark of Obstructive Sleep Apnea, Alters the Gut Microbiome and Metabolome

SIRIUS 4: a rapid tool for turning tandem mass spectra into metabolite structure information

The Molecular Effect of Wearing Silver-Threaded Clothing on the Human Skin

Indexing the Pseudomonas specialized metabolome enabled the discovery of poaeamide B and the bananamides

Multi-omic approach to decipher the impact of skincare products with pre/postbiotics on skin microbiome and metabolome

Best practices for analysing microbiomes

Metabolic Profiling of Interspecies Interactions During Sessile Bacterial Cultivation Reveals Growth and Sporulation Induction in Paenibacillus amylolyticus in Response to Xanthomonas retroflexus

Antimicrobials from human skin commensal bacteria protect against Staphylococcus aureus and are deficient in atopic dermatitis

Intermittent Hypoxia and Hypercapnia Reproducibly Change the Gut Microbiome and Metabolome across Rodent Model Systems

B. infantis EVC001 Is Well-Tolerated and Improves Human Milk Oligosaccharide Utilization in Preterm Infants in the Neonatal Intensive Care Unit

Mass spectrometry searches using MASST

ReDU: a framework to find and reanalyze public mass spectrometry data

From Sample to Multi-Omics Conclusions in under 48 Hours

Lugdunomycin, an Angucycline‐Derived Molecule with Unprecedented Chemical Architecture

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