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HumanNet v3: an improved database of human gene networks for disease research

Nucleic acids research, 2022-01, Vol.50 (D1), p.D632-D639

2022

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Amino acid sequence assignment from single molecule peptide sequencing data using a two-stage classifier

PLoS computational biology, 2023-05, Vol.19 (5), p.e1011157-e1011157

2023

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Systematic comparison of variant calling pipelines using gold standard personal exome variants

Scientific reports, 2015-12, Vol.5 (1), p.17875-17875, Article 17875

2015

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Characterising and predicting haploinsufficiency in the human genome

PLoS genetics, 2010-10, Vol.6 (10), p.e1001154

2010

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hu.MAP 2.0: integration of over 15,000 proteomic experiments builds a global compendium of human multiprotein assemblies

Molecular systems biology, 2021-05, Vol.17 (5), p.e10016-n/a

2021

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Systematic humanization of yeast genes reveals conserved functions and genetic modularity

Science (American Association for the Advancement of Science), 2015-05, Vol.348 (6237), p.921-925

2015

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Prioritizing candidate disease genes by network-based boosting of genome-wide association data

Genome research, 2011-07, Vol.21 (7), p.1109-1121

2011

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A Census of Human Soluble Protein Complexes

Cell, 2012-08, Vol.150 (5), p.1068-1081

2012

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A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies

Cell, 2020-04, Vol.181 (2), p.460-474.e14

2020

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Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation

Nature biotechnology, 2007-01, Vol.25 (1), p.117-124

2007

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Integration of over 9,000 mass spectrometry experiments builds a global map of human protein complexes

Molecular systems biology, 2017-06, Vol.13 (6), p.932-n/a

2017

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A Bacteriophage tailspike domain promotes self-cleavage of a human membrane-bound transcription factor, the myelin regulatory factor MYRF

PLoS biology, 2013-08, Vol.11 (8), p.e1001624-e1001624

2013

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Molecular complex detection in protein interaction networks through reinforcement learning

BMC bioinformatics, 2023-08, Vol.24 (1), p.306-306, Article 306

2023

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A theoretical justification for single molecule peptide sequencing

PLoS computational biology, 2015-02, Vol.11 (2), p.e1004080-e1004080

2015

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Global signatures of protein and mRNA expression levels

Molecular bioSystems, 2009-01, Vol.5 (12), p.1512-1526

2009

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Humanization of yeast genes with multiple human orthologs reveals functional divergence between paralogs

PLoS biology, 2020-05, Vol.18 (5), p.e3000627-e3000627

2020

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Insights into the regulation of protein abundance from proteomic and transcriptomic analyses

Nature reviews. Genetics, 2012-04, Vol.13 (4), p.227-232

2012

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A high-accuracy consensus map of yeast protein complexes reveals modular nature of gene essentiality

BMC bioinformatics, 2007-07, Vol.8 (1), p.236-236, Article 236

2007

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Identification and characterization of the constituent human serum antibodies elicited by vaccination

Proceedings of the National Academy of Sciences - PNAS, 2014-02, Vol.111 (6), p.2259-2264

2014

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Revisiting the negative example sampling problem for predicting protein-protein interactions

Bioinformatics, 2011-11, Vol.27 (21), p.3024-3028

2011

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Rational extension of the ribosome biogenesis pathway using network-guided genetics

PLoS biology, 2009-10, Vol.7 (10), p.e1000213-e1000213

2009

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Native doublet microtubules from Tetrahymena thermophila reveal the importance of outer junction proteins

Nature communications, 2023-04, Vol.14 (1), p.2168-2168, Article 2168

2023

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Paternal chromosome loss and metabolic crisis contribute to hybrid inviability in Xenopus

Nature (London), 2018-01, Vol.553 (7688), p.337-341

2018

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Widespread Reorganization of Metabolic Enzymes into Reversible Assemblies upon Nutrient Starvation

Proceedings of the National Academy of Sciences - PNAS, 2009-06, Vol.106 (25), p.10147-10152

2009

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Genetic dissection of the biotic stress response using a genome-scale gene network for rice

Proceedings of the National Academy of Sciences - PNAS, 2011-11, Vol.108 (45), p.18548-18553

2011

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HumanNet v3: an improved database of human gene networks for disease research

Amino acid sequence assignment from single molecule peptide sequencing data using a two-stage classifier

Systematic comparison of variant calling pipelines using gold standard personal exome variants

Characterising and predicting haploinsufficiency in the human genome

hu.MAP 2.0: integration of over 15,000 proteomic experiments builds a global compendium of human multiprotein assemblies

Systematic humanization of yeast genes reveals conserved functions and genetic modularity

Prioritizing candidate disease genes by network-based boosting of genome-wide association data

A Census of Human Soluble Protein Complexes

A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies

Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation

Integration of over 9,000 mass spectrometry experiments builds a global map of human protein complexes

A Bacteriophage tailspike domain promotes self-cleavage of a human membrane-bound transcription factor, the myelin regulatory factor MYRF

Molecular complex detection in protein interaction networks through reinforcement learning

A theoretical justification for single molecule peptide sequencing

Global signatures of protein and mRNA expression levels

Humanization of yeast genes with multiple human orthologs reveals functional divergence between paralogs

Insights into the regulation of protein abundance from proteomic and transcriptomic analyses

A high-accuracy consensus map of yeast protein complexes reveals modular nature of gene essentiality

Identification and characterization of the constituent human serum antibodies elicited by vaccination

Revisiting the negative example sampling problem for predicting protein-protein interactions

Rational extension of the ribosome biogenesis pathway using network-guided genetics

Native doublet microtubules from Tetrahymena thermophila reveal the importance of outer junction proteins

Paternal chromosome loss and metabolic crisis contribute to hybrid inviability in Xenopus

Widespread Reorganization of Metabolic Enzymes into Reversible Assemblies upon Nutrient Starvation

Genetic dissection of the biotic stress response using a genome-scale gene network for rice

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