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Genetic Landscape of Human Papillomavirus-Associated Head and Neck Cancer and Comparison to Tobacco-Related Tumors

Journal of clinical oncology, 2015-10, Vol.33 (29), p.3227-3234

2015

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Increasing Incidence of Oral Tongue Squamous Cell Carcinoma in Young White Women, Age 18 to 44 Years

Journal of clinical oncology, 2011-04, Vol.29 (11), p.1488-1494

2011

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Activation of the PD-1 pathway contributes to immune escape in EGFR-driven lung tumors

Cancer discovery, 2013-12, Vol.3 (12), p.1355-1363

2013

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Lung Adenocarcinoma and Squamous Cell Carcinoma Gene Expression Subtypes Demonstrate Significant Differences in Tumor Immune Landscape

Journal of thoracic oncology, 2017-06, Vol.12 (6), p.943-953

2017

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ABRA: improved coding indel detection via assembly-based realignment

Bioinformatics (Oxford, England), 2014-10, Vol.30 (19), p.2813-2815

2014

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Fbxw7 is a driver of uterine carcinosarcoma by promoting epithelial-mesenchymal transition

Proceedings of the National Academy of Sciences - PNAS, 2019-12, Vol.116 (51), p.25880-25890

2019

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Origins and functional consequences of somatic mitochondrial DNA mutations in human cancer

eLife, 2014-10, Vol.3

2014

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Therapeutic insights from genomic studies of head and neck squamous cell carcinomas

Cancer discovery, 2015-03, Vol.5 (3), p.239-244

2015

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BRG1/SMARCA4 inactivation promotes non-small cell lung cancer aggressiveness by altering chromatin organization

Cancer research (Chicago, Ill.), 2014-11, Vol.74 (22), p.6486-6498

2014

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PIK3CA Mutation in HPV-Associated OPSCC Patients Receiving Deintensified Chemoradiation

JNCI : Journal of the National Cancer Institute, 2020-08, Vol.112 (8), p.855-858

2020

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SCISSOR: a framework for identifying structural changes in RNA transcripts

Nature communications, 2021-01, Vol.12 (1), p.286-12, Article 286

2021

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Multi-tiered genomic analysis of head and neck cancer ties TP53 mutation to 3p loss

Nature genetics, 2014-09, Vol.46 (9), p.939-943

2014

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Inhibitor-Sensitive FGFR2 and FGFR3 Mutations in Lung Squamous Cell Carcinoma

Cancer research (Chicago, Ill.), 2013-08, Vol.73 (16), p.5195-5205

2013

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Cisplatin and Radiotherapy With or Without Erlotinib in Locally Advanced Squamous Cell Carcinoma of the Head and Neck: A Randomized Phase II Trial

Journal of clinical oncology, 2013-04, Vol.31 (11), p.1415-1421

2013

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Factor XIIIA-expressing inflammatory monocytes promote lung squamous cancer through fibrin cross-linking

Nature communications, 2018-05, Vol.9 (1), p.1988-19, Article 1988

2018

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Integrative and Comparative Genomic Analysis of Lung Squamous Cell Carcinomas in East Asian Patients

Journal of clinical oncology, 2014-01, Vol.32 (2), p.121-128

2014

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ConsensusClusterPlus: a class discovery tool with confidence assessments and item tracking

Bioinformatics, 2010-06, Vol.26 (12), p.1572-1573

2010

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Enhancing Next‐Generation Sequencing‐Guided Cancer Care Through Cognitive Computing

The oncologist (Dayton, Ohio), 2018-02, Vol.23 (2), p.179-185

2018

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RNA Oncoimmune Phenotyping of HPV-Positive p16-Positive Oropharyngeal Squamous Cell Carcinomas by Nodal Status

JAMA otolaryngology-- head & neck surgery, 2018-11, Vol.144 (11), p.967

2018

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MVisAGe Identifies Concordant and Discordant Genomic Alterations of Driver Genes in Squamous Tumors

Cancer research (Chicago, Ill.), 2018-06, Vol.78 (12), p.3375-3385

2018

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Integrated RNA and DNA sequencing improves mutation detection in low purity tumors

Nucleic acids research, 2014-07, Vol.42 (13), p.e107-e107

2014

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Genetic Landscape of Human Papillomavirus-Associated Head and Neck Cancer and Comparison to Tobacco-Related Tumors

Increasing Incidence of Oral Tongue Squamous Cell Carcinoma in Young White Women, Age 18 to 44 Years

Activation of the PD-1 pathway contributes to immune escape in EGFR-driven lung tumors

Lung Adenocarcinoma and Squamous Cell Carcinoma Gene Expression Subtypes Demonstrate Significant Differences in Tumor Immune Landscape

ABRA: improved coding indel detection via assembly-based realignment

Fbxw7 is a driver of uterine carcinosarcoma by promoting epithelial-mesenchymal transition

Origins and functional consequences of somatic mitochondrial DNA mutations in human cancer

Therapeutic insights from genomic studies of head and neck squamous cell carcinomas

BRG1/SMARCA4 inactivation promotes non-small cell lung cancer aggressiveness by altering chromatin organization

PIK3CA Mutation in HPV-Associated OPSCC Patients Receiving Deintensified Chemoradiation

SCISSOR: a framework for identifying structural changes in RNA transcripts

Multi-tiered genomic analysis of head and neck cancer ties TP53 mutation to 3p loss

A murine lung cancer co-clinical trial identifies genetic modifiers of therapeutic response

Inhibitor-Sensitive FGFR2 and FGFR3 Mutations in Lung Squamous Cell Carcinoma

Molecular subtypes in head and neck cancer exhibit distinct patterns of chromosomal gain and loss of canonical cancer genes

Summary from an international cancer seminar focused on human papillomavirus (HPV)-positive oropharynx cancer, convened by scientists at IARC and NCI

Cisplatin and Radiotherapy With or Without Erlotinib in Locally Advanced Squamous Cell Carcinoma of the Head and Neck: A Randomized Phase II Trial

Factor XIIIA-expressing inflammatory monocytes promote lung squamous cancer through fibrin cross-linking

Integrative and Comparative Genomic Analysis of Lung Squamous Cell Carcinomas in East Asian Patients

ConsensusClusterPlus: a class discovery tool with confidence assessments and item tracking

Enhancing Next‐Generation Sequencing‐Guided Cancer Care Through Cognitive Computing

RNA Oncoimmune Phenotyping of HPV-Positive p16-Positive Oropharyngeal Squamous Cell Carcinomas by Nodal Status

MVisAGe Identifies Concordant and Discordant Genomic Alterations of Driver Genes in Squamous Tumors

LKB1 modulates lung cancer differentiation and metastasis

Integrated RNA and DNA sequencing improves mutation detection in low purity tumors

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