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Morphophenotypic classification of tumor organoids as an indicator of drug exposure and penetration potential

PLoS computational biology, 2019-07, Vol.15 (7), p.e1007214

2019

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LinG3D: visualizing the spatio-temporal dynamics of clonal evolution

BMC bioinformatics, 2024-05, Vol.25 (1), p.201-201, Article 201

2024

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Hybrid models of tumor growth

Wiley interdisciplinary reviews. Mechanisms of disease, 2011-01, Vol.3 (1), p.115-125

2011

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Bridging cell-scale simulations and radiologic images to explain short-time intratumoral oxygen fluctuations

PLoS computational biology, 2021-07, Vol.17 (7), p.e1009206-e1009206

2021

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Drug-Induced Resistance in Micrometastases: Analysis of Spatio-Temporal Cell Lineages

Frontiers in physiology, 2020-04, Vol.11, p.319-319

2020

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Hypoxia in Gliomas: Opening Therapeutical Opportunities Using a Mathematical-Based Approach

Advances in experimental medicine and biology, 2016, Vol.936, p.11-29

2016

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Exploring chronic and transient tumor hypoxia for predicting the efficacy of hypoxia-activated pro-drugs

NPJ systems biology and applications, 2024-01, Vol.10 (1), p.1-1, Article 1

2024

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Collective Cell Migration in a Fibrous Environment: A Hybrid Multiscale Modelling Approach

Frontiers in applied mathematics and statistics, 2021-06, Vol.7

2021

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Modeling Proteolytically Driven Tumor Lymphangiogenesis

Advances in Experimental Medicine and Biology, 2016-01, Vol.936, p.107-136

2016

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Targeting Ligand Specificity Linked to Tumor Tissue Topological Heterogeneity via Single-Cell Micro-Pharmacological Modeling

Scientific reports, 2018-02, Vol.8 (1), p.3638-14, Article 3638

2018

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Towards personalized computational oncology: from spatial models of tumour spheroids, to organoids, to tissues

Journal of the Royal Society interface, 2018-01, Vol.15 (138), p.20170703

2018

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Comparison of Drug Inhibitory Effects (IC50) in Monolayer and Spheroid Cultures

Bulletin of mathematical biology, 2020-06, Vol.82 (6), p.68-68, Article 68

2020

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Hybrid modeling frameworks of tumor development and treatment

Wiley interdisciplinary reviews. Mechanisms of disease, 2020-01, Vol.12 (1), p.e1461-n/a

2020

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An immersed boundary framework for modelling the growth of individual cells: An application to the early tumour development

Journal of theoretical biology, 2007-07, Vol.247 (1), p.186-204

Rejniak, Katarzyna A.

2007

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Invasion emerges from cancer cell adaptation to competitive microenvironments: Quantitative predictions from multiscale mathematical models

Seminars in cancer biology, 2008-10, Vol.18 (5), p.338-348

2008

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Computer Simulations of the Tumor Vasculature: Applications to Interstitial Fluid Flow, Drug Delivery, and Oxygen Supply

Advances in experimental medicine and biology, 2016, Vol.936, p.31-72

2016

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Micropharmacology: An In Silico Approach for Assessing Drug Efficacy Within a Tumor Tissue

Bulletin of mathematical biology, 2019-09, Vol.81 (9), p.3623-3641

2019

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Linking changes in epithelial morphogenesis to cancer mutations using computational modeling

PLoS computational biology, 2010-08, Vol.6 (8), p.e1000900

2010

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A Computational Study of the Development of Epithelial Acini: I. Sufficient Conditions for the Formation of a Hollow Structure

Bulletin of mathematical biology, 2008-04, Vol.70 (3), p.677-712

2008

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Microenvironment-Mediated Modeling of Tumor Response to Vascular-Targeting Drugs

Advances in experimental medicine and biology, 2016, Vol.936, p.191-208

2016

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Homeostatic Imbalance in Epithelial Ducts and Its Role in Carcinogenesis

Scientifica (Cairo), 2012-01, Vol.2012 (2012), p.1-8

2012

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Cellular modeling of cancer invasion: Integration of in silico and in vitro approaches

Journal of cellular physiology, 2012-02, Vol.227 (2), p.431-438

2012

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Segmentation and tracking of adherens junctions in 3D for the analysis of epithelial tissue morphogenesis

PLoS computational biology, 2015-04, Vol.11 (4), p.e1004124-e1004124

2015

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Computational Study of the Development of Epithelial Acini: II. Necessary Conditions for Structure and Lumen Stability

Bulletin of mathematical biology, 2008-07, Vol.70 (5), p.1450-1479

2008

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Investigating dynamical deformations of tumor cells in circulation: predictions from a theoretical model

Frontiers in oncology, 2012, Vol.2, p.111-111

Rejniak, Katarzyna A

2012

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Morphophenotypic classification of tumor organoids as an indicator of drug exposure and penetration potential

LinG3D: visualizing the spatio-temporal dynamics of clonal evolution

Hybrid models of tumor growth

Bridging cell-scale simulations and radiologic images to explain short-time intratumoral oxygen fluctuations

Drug-Induced Resistance in Micrometastases: Analysis of Spatio-Temporal Cell Lineages

Hypoxia in Gliomas: Opening Therapeutical Opportunities Using a Mathematical-Based Approach

Exploring chronic and transient tumor hypoxia for predicting the efficacy of hypoxia-activated pro-drugs

Collective Cell Migration in a Fibrous Environment: A Hybrid Multiscale Modelling Approach

Modeling Proteolytically Driven Tumor Lymphangiogenesis

Targeting Ligand Specificity Linked to Tumor Tissue Topological Heterogeneity via Single-Cell Micro-Pharmacological Modeling

Towards personalized computational oncology: from spatial models of tumour spheroids, to organoids, to tissues

Comparison of Drug Inhibitory Effects (IC50) in Monolayer and Spheroid Cultures

Hybrid modeling frameworks of tumor development and treatment

An immersed boundary framework for modelling the growth of individual cells: An application to the early tumour development

Invasion emerges from cancer cell adaptation to competitive microenvironments: Quantitative predictions from multiscale mathematical models

Computer Simulations of the Tumor Vasculature: Applications to Interstitial Fluid Flow, Drug Delivery, and Oxygen Supply

Micropharmacology: An In Silico Approach for Assessing Drug Efficacy Within a Tumor Tissue

Linking changes in epithelial morphogenesis to cancer mutations using computational modeling

A Computational Study of the Development of Epithelial Acini: I. Sufficient Conditions for the Formation of a Hollow Structure

Microenvironment-Mediated Modeling of Tumor Response to Vascular-Targeting Drugs

Homeostatic Imbalance in Epithelial Ducts and Its Role in Carcinogenesis

Cellular modeling of cancer invasion: Integration of in silico and in vitro approaches

Segmentation and tracking of adherens junctions in 3D for the analysis of epithelial tissue morphogenesis

Computational Study of the Development of Epithelial Acini: II. Necessary Conditions for Structure and Lumen Stability

Investigating dynamical deformations of tumor cells in circulation: predictions from a theoretical model

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